RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ZNF124Q15973 351 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 VWC2Q2TAL6 325 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 ACOT6Q3I5F7 207 aaPredicted RBP4.38□□□□□ -1.71
VPS25-204ENST00000589577 TIGITQ495A1 244 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 BAP18Q8IXM2 172 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 THAP8Q8NA92 274 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 MARC2Q969Z3 335 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 RNF125Q96EQ8 232 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 PSMG3Q9BT73 122 aaPredicted RBP4.38□□□□□ -1.71
VPS25-204ENST00000589577 CHRDL1Q9BU40 450 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 NPCDR1Q9BY65 106 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 WDR61Q9GZS3 305 aaKnown RBP4.38□□□□□ -1.71
VPS25-204ENST00000589577 DAZ1Q9NQZ3 744 aaKnown RBP4.38□□□□□ -1.71
VPS25-204ENST00000589577 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 RABAC1Q9UI14 185 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 TIMM9Q9Y5J7 89 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 PUS1Q9Y606 427 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS25-204ENST00000589577 PXMP4Q9Y6I8 212 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 LRP2P98164 4655 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 IGHV3-35A0A0C4DH35 117 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 UMAD1C9J7I0 102 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 HYPMO75409 117 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 OR2C1O95371 312 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 CTSGP08311 255 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 PSG1P11464 419 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 ORM2P19652 201 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 NPPCP23582 126 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 ELLP55199 621 aaPredicted RBP4.37□□□□□ -1.71
VPS25-204ENST00000589577 RHOBP62745 196 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 ARL16Q0P5N6 197 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 OPCMLQ14982 345 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 MLANAQ16655 118 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 FFAR4Q5NUL3 377 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 SERTAD4-AS1Q5TG53 156 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 RPL7L1Q6DKI1 246 aaKnown RBP4.37□□□□□ -1.71
VPS25-204ENST00000589577 LAMTOR1Q6IAA8 161 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 GPHB5Q86YW7 130 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 OR11H4Q8NGC9 324 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 OR1B1Q8NGR6 318 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 OR2G3Q8NGZ4 309 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 STOML3Q8TAV4 291 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 ZNF503Q96F45 646 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 RSG1Q9BU20 258 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 NDUFAF3Q9BU61 184 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 CSTL1Q9H114 145 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 SLC39A9Q9NUM3 307 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 SLC45A2Q9UMX9 530 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 CELA1Q9UNI1 258 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 HIGD1AQ9Y241 93 aa4.37□□□□□ -1.71
VPS25-204ENST00000589577 DEFB131BA0A096LNP1 70 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 TRAV25A0A0B4J276 109 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 G3V3Q6 166 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 BOLA2-SMG1P6H3BVE0 249 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 K7EMT4 169 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 IFNA7P01567 189 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 IGKV1-17P01599 117 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 SEC11BP0C7V7 166 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 RPL7P18124 248 aaKnown RBP4.36□□□□□ -1.71
VPS25-204ENST00000589577 CXCL2P19875 107 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 M6PRP20645 277 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 ATP6V0CP27449 155 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 ADMP35318 185 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 RAB5CP51148 216 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 NKX2-5P52952 324 aaPredicted RBP4.36□□□□□ -1.71
VPS25-204ENST00000589577 PAFAH1B2P68402 229 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 ZNF90Q03938 601 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 CD300CQ08708 224 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 LGALSLQ3ZCW2 172 aaPredicted RBP4.36□□□□□ -1.71
VPS25-204ENST00000589577 SAMD13Q5VXD3 122 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 C10orf113Q5VZT2 155 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 MIC13Q5XKP0 118 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 ZNF767PQ75MW2 155 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 APRG1Q8IVJ8 170 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 OR8I2Q8N0Y5 310 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 C9orf62Q8N4C0 152 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 STXBP6Q8NFX7 210 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 LRRC20Q8TCA0 184 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 FRZBQ92765 325 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 PHYHIPLQ96FC7 376 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 GPR82Q96P67 336 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 MGST2Q99735 147 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 SPAG8Q99932 426 aaPredicted RBP4.36□□□□□ -1.71
VPS25-204ENST00000589577 MRPL32Q9BYC8 188 aaKnown RBP4.36□□□□□ -1.71
VPS25-204ENST00000589577 SLC25A32Q9H2D1 315 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 DNAJC4Q9NNZ3 241 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 DOK5Q9P104 306 aa4.36□□□□□ -1.71
VPS25-204ENST00000589577 HELTA6NFD8 242 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 C8orf88P0DMB2 117 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 GALR1P47211 349 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 CDC34P49427 236 aaPredicted RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 MEOX2P50222 304 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 RAB14P61106 215 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 RPL11P62913 178 aaKnown RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 C12orf74Q32Q52 190 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 KHDC3LQ587J8 217 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 TMEM41BQ5BJD5 291 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms