RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
SS18-225ENST00000585121 FXYD6-FXYD2A0A087WZ82 144 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 A0A0D9SG52 128 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 SMIM9A6NGZ8 99 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 F6UB75 175 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 ARPC5O15511 151 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 COX7A2P2O60397 106 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 ARL16Q0P5N6 197 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 ZNF345Q14585 488 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 STX12Q86Y82 276 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 INO80EQ8NBZ0 244 aaPredicted RBP8.95□□□□□ -0.98
SS18-225ENST00000585121 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 UHRF2Q96PU4 802 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 NEU1Q99519 415 aa8.95□□□□□ -0.98
SS18-225ENST00000585121 TRAV10A0A0B4J240 114 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 FAM24AA6NFZ4 105 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 IGLL5B9A064 214 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 E5RGE8 158 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 H0YIZ8 118 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 CST7O76096 145 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 AMBPP02760 352 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 S100A11P31949 105 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 CAMLGP49069 296 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 HBG1P69891 147 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 HBG2P69892 147 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 ZNF705AQ6ZN79 300 aaPredicted RBP8.94□□□□□ -0.98
SS18-225ENST00000585121 Q6ZRG5 221 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 ZNF738Q8NE65 137 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 SLC35B3Q9H1N7 401 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 UQCC1Q9NVA1 299 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 MBD2Q9UBB5 411 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 RFNGQ9Y644 331 aa8.94□□□□□ -0.98
SS18-225ENST00000585121 CXCL2P19875 107 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 SULT1A1P50225 295 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 Q6ZTC4 211 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 LINC00305Q7Z4B0 112 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 ZNF709Q8N972 641 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 MGST2Q99735 147 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 TMEM208Q9BTX3 173 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 LYRM2Q9NU23 88 aaPredicted RBP8.93□□□□□ -0.98
SS18-225ENST00000585121 PPP1R14DQ9NXH3 145 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 BOLA1Q9Y3E2 137 aa8.93□□□□□ -0.98
SS18-225ENST00000585121 A0A087X0K7 114 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 TEX48A0A1B0GUV7 120 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 ZNF705FA8MVS1 300 aaPredicted RBP8.92□□□□□ -0.98
SS18-225ENST00000585121 HBE1P02100 147 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 ZNF705DP0CH99 300 aaPredicted RBP8.92□□□□□ -0.98
SS18-225ENST00000585121 ZNF705BP0CI00 300 aaPredicted RBP8.92□□□□□ -0.98
SS18-225ENST00000585121 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 C10orf113Q5VZT2 155 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 IGFL4Q6B9Z1 124 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 PATE2Q6UY27 113 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 TMUB2Q71RG4 321 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 BPIFA4PQ86YQ2 179 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 KCNRGQ8N5I3 272 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 RNF182Q8N6D2 247 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 OR1L4Q8NGR5 311 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 C17orf77Q96MU5 243 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 AQP10Q96PS8 301 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 OR5AC2Q9NZP5 309 aa8.92□□□□□ -0.98
SS18-225ENST00000585121 TRAV8-2A0A0B4J237 113 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 CNN1P51911 297 aaKnown RBP8.91□□□□□ -0.98
SS18-225ENST00000585121 EMP1P54849 157 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 BAXQ07812 192 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 OPCMLQ14982 345 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 PSG3Q16557 428 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 ATP6V1FQ16864 119 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 LCN15Q6UWW0 184 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 IGF2BP2-AS1Q96M15 143 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 C11orf1Q9H5F2 150 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 DNAJC4Q9NNZ3 241 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 CELA1Q9UNI1 258 aa8.91□□□□□ -0.98
SS18-225ENST00000585121 RNF222A6NCQ9 220 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 RHOBP62745 196 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 TMEM252Q8N6L7 170 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 PFDN5Q99471 154 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 SLC50A1Q9BRV3 221 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 WDR83OSQ9Y284 106 aa8.9□□□□□ -0.98
SS18-225ENST00000585121 DEFB131BA0A096LNP1 70 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 UBE2L5PA0A1B0GUS4 154 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 A8MTW9 85 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 INSP01308 110 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 RPL12P30050 165 aaKnown RBP8.9□□□□□ -0.99
SS18-225ENST00000585121 B2MP61769 119 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 IFITM2Q01629 132 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 HIST1H1AQ02539 215 aaPredicted RBP8.9□□□□□ -0.99
SS18-225ENST00000585121 C12orf74Q32Q52 190 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 MIC13Q5XKP0 118 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 SLC25A31Q9H0C2 315 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 KMT2AQ03164 3969 aa8.9□□□□□ -0.99
SS18-225ENST00000585121 LOC102723971A0A1B0GUV8 181 aa8.89□□□□□ -0.99
SS18-225ENST00000585121 KANTRA0A1W2PQU2 76 aa8.89□□□□□ -0.99
SS18-225ENST00000585121 IGSF23A1L1A6 192 aa8.89□□□□□ -0.99
SS18-225ENST00000585121 TAAR5O14804 337 aa8.89□□□□□ -0.99
SS18-225ENST00000585121 RGS13O14921 159 aa8.89□□□□□ -0.99
SS18-225ENST00000585121 RPL29P47914 159 aaKnown RBP8.89□□□□□ -0.99
SS18-225ENST00000585121 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms