RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	ZNF709	Q8N972	641 aa		11.82	□□□□□ -0.52
ERBB2-222	ENST00000584908	SLC50A1	Q9BRV3	221 aa		11.82	□□□□□ -0.52
ERBB2-222	ENST00000584908	HRH4	Q9H3N8	390 aa		11.82	□□□□□ -0.52
ERBB2-222	ENST00000584908	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.82	□□□□□ -0.52
ERBB2-222	ENST00000584908		F6UB75	175 aa		11.81	□□□□□ -0.52
ERBB2-222	ENST00000584908	FAM78B	Q5VT40	261 aa		11.81	□□□□□ -0.52
ERBB2-222	ENST00000584908	IGFL4	Q6B9Z1	124 aa		11.81	□□□□□ -0.52
ERBB2-222	ENST00000584908	RNF182	Q8N6D2	247 aa		11.81	□□□□□ -0.52
ERBB2-222	ENST00000584908	TRAV5	A0A0B4J249	113 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908	C17orf112	F2Z3M2	114 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908	PSG3	Q16557	428 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908	GUK1	Q16774	197 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908	AMTN	Q6UX39	209 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908		Q8NAQ8	132 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908	SAT2	Q96F10	170 aa	Predicted RBP	11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908	TMEM14C	Q9P0S9	112 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908		X6R8D5	127 aa		11.8	□□□□□ -0.52
ERBB2-222	ENST00000584908		H3BQ15	152 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	ZNF253	O75346	499 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	DUSP14	O95147	198 aa	Known RBP	11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	MIF	P14174	115 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	PSG9	Q00887	426 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	GCSAML	Q5JQS6	135 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	ZFAND6	Q6FIF0	208 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	OR4B1	Q8NGF8	309 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	LRRC20	Q8TCA0	184 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	AQP10	Q96PS8	301 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	WFDC1	Q9HC57	220 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	CLEC5A	Q9NY25	188 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	XCL2	Q9UBD3	114 aa		11.79	□□□□□ -0.52
ERBB2-222	ENST00000584908	SLC17A3	O00476	420 aa		11.78	□□□□□ -0.52
ERBB2-222	ENST00000584908	IFNA5	P01569	189 aa		11.78	□□□□□ -0.52
ERBB2-222	ENST00000584908	HLA-DMB	P28068	263 aa		11.78	□□□□□ -0.52
ERBB2-222	ENST00000584908		Q5BKY6	102 aa		11.78	□□□□□ -0.52
ERBB2-222	ENST00000584908	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.78	□□□□□ -0.52
ERBB2-222	ENST00000584908	SMIM3	Q9BZL3	60 aa		11.78	□□□□□ -0.52
ERBB2-222	ENST00000584908	IGKV3-20	P01619	116 aa		11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	CNN1	P51911	297 aa	Known RBP	11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF738	Q8NE65	137 aa		11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	FAM167A-AS1	Q96KT0	104 aa		11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	NEU1	Q99519	415 aa		11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	MRPL32	Q9BYC8	188 aa	Known RBP	11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	SLC35B3	Q9H1N7	401 aa		11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF586	Q9NXT0	402 aa		11.77	□□□□□ -0.53
ERBB2-222	ENST00000584908	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	TRBV19	A0A075B6N1	114 aa		11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF705D	P0CH99	300 aa	Predicted RBP	11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF705B	P0CI00	300 aa	Predicted RBP	11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	HIST1H1E	P10412	219 aa	Known RBP	11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	PDE6H	Q13956	83 aa		11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	OR8A1	Q8NGG7	326 aa		11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	SCGB1C1	Q8TD33	95 aa		11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	RPUSD4	Q96CM3	377 aa	Known RBP	11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	SLC25A2	Q9BXI2	301 aa		11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	LYST	Q99698	3801 aa		11.76	□□□□□ -0.53
ERBB2-222	ENST00000584908	IGHV4-28	A0A0C4DH34	117 aa		11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	AMBP	P02760	352 aa		11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	SNRPC	P09234	159 aa	Known RBP	11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	RBMY1A1	P0DJD3	496 aa	Known RBP	11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	RBMY1C	P0DJD4	496 aa		11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	RBMY1F	Q15415	496 aa	Known RBP	11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	MFF	Q9GZY8	342 aa		11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908	FUT9	Q9Y231	359 aa		11.75	□□□□□ -0.53
ERBB2-222	ENST00000584908		G3V3Q6	166 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908		H3BTX0	84 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	NDUFB4	O95168	129 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	FXYD7	P58549	80 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	FFAR4	Q5NUL3	377 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	MIR17HG	Q75NE6	70 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	OR2T35	Q8NGX2	323 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	MRPL53	Q96EL3	112 aa	Known RBP	11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	TIMM9	Q9Y5J7	89 aa		11.74	□□□□□ -0.53
ERBB2-222	ENST00000584908	RNF222	A6NCQ9	220 aa		11.73	□□□□□ -0.53
ERBB2-222	ENST00000584908	SMIM9	A6NGZ8	99 aa		11.73	□□□□□ -0.53
ERBB2-222	ENST00000584908	PYY	P10082	97 aa		11.73	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF266	Q14584	549 aa		11.73	□□□□□ -0.53
ERBB2-222	ENST00000584908	IGF2BP2-AS1	Q96M15	143 aa		11.73	□□□□□ -0.53
ERBB2-222	ENST00000584908	TNFSF18	Q9UNG2	199 aa		11.73	□□□□□ -0.53
ERBB2-222	ENST00000584908	DEFB4A	O15263	64 aa		11.72	□□□□□ -0.53
ERBB2-222	ENST00000584908	CRX	O43186	299 aa	Predicted RBP	11.72	□□□□□ -0.53
ERBB2-222	ENST00000584908	HIST1H1A	Q02539	215 aa	Predicted RBP	11.72	□□□□□ -0.53
ERBB2-222	ENST00000584908	C1orf158	Q8N1D5	194 aa		11.72	□□□□□ -0.53
ERBB2-222	ENST00000584908	OR51M1	Q9H341	326 aa		11.72	□□□□□ -0.53
ERBB2-222	ENST00000584908	NUPR2	A6NF83	97 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	BOLA2-SMG1P6	H3BVE0	249 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	RHOB	P62745	196 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	OR2G3	Q8NGZ4	309 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	C11orf45	Q8TAV5	145 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	FXYD5	Q96DB9	178 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	ZNF503	Q96F45	646 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	PSMG3	Q9BT73	122 aa	Predicted RBP	11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	PRELID1	Q9Y255	219 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	RFNG	Q9Y644	331 aa		11.71	□□□□□ -0.53
ERBB2-222	ENST00000584908	PLEC	Q15149	4684 aa	Known RBP	11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	CXorf65	A6NEN9	183 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	PRAC2	D3DTV9	90 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908		M0R2Z0	102 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	NBEAP1	P0C6P0	100 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms