RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 MBD2Q9UBB5 411 aa7.35□□□□□ -1.23
GGA3-219ENST00000584550 SLC45A2Q9UMX9 530 aa7.35□□□□□ -1.23
GGA3-219ENST00000584550 WDR83OSQ9Y284 106 aa7.35□□□□□ -1.23
GGA3-219ENST00000584550 A0A1B0GVG6 124 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 H3BRN7 92 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 COX7A2P2O60397 106 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 S100A7P31151 101 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 GALR1P47211 349 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
GGA3-219ENST00000584550 FGL1Q08830 312 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 ATP6V1FQ16864 119 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 ACTL10Q5JWF8 245 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 MIC13Q5XKP0 118 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 PATE2Q6UY27 113 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 Q6ZR54 194 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 THAP6Q8TBB0 222 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 LINC00052Q96N35 136 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 CELA1Q9UNI1 258 aa7.34□□□□□ -1.23
GGA3-219ENST00000584550 AMBPP02760 352 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 RPL12P30050 165 aaKnown RBP7.33□□□□□ -1.24
GGA3-219ENST00000584550 ID1P41134 155 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 PLP1P60201 277 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 OXA1LQ15070 435 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 VWC2Q2TAL6 325 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 C1orf134Q5TEV5 83 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 Q6ZRG5 221 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 STHQ8IWL8 128 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 C16orf92Q96LL3 132 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 SMIM3Q9BZL3 60 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 ARV1Q9H2C2 271 aa7.33□□□□□ -1.24
GGA3-219ENST00000584550 PFDN1O60925 122 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
GGA3-219ENST00000584550 DEFB1P60022 68 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 TNP2Q05952 138 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 PXDC1Q5TGL8 231 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 C10orf113Q5VZT2 155 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 IGFL4Q6B9Z1 124 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 S100A7AQ86SG5 101 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 SLC39A9Q9NUM3 307 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 CLEC5AQ9NY25 188 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 HSPB11Q9Y547 144 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 PXMP4Q9Y6I8 212 aa7.32□□□□□ -1.24
GGA3-219ENST00000584550 TRAV5A0A0B4J249 113 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 GIG44P09565 113 aaPredicted RBP7.31□□□□□ -1.24
GGA3-219ENST00000584550 MIFP14174 115 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 RPL7P18124 248 aaKnown RBP7.31□□□□□ -1.24
GGA3-219ENST00000584550 RPL29P47914 159 aaKnown RBP7.31□□□□□ -1.24
GGA3-219ENST00000584550 B2MP61769 119 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 OPCMLQ14982 345 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 Q5BKY6 102 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 LRRC20Q8TCA0 184 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 TMEM37Q8WXS4 190 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 GPR82Q96P67 336 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 ATP5SQ99766 215 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 NPCDR1Q9BY65 106 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 DNAJC4Q9NNZ3 241 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 X6R8D5 127 aa7.31□□□□□ -1.24
GGA3-219ENST00000584550 H3BTX0 84 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 SOCS3O14543 225 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 MPDU1O75352 247 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 IFNA5P01569 189 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 GIPP09681 153 aaPredicted RBP7.3□□□□□ -1.24
GGA3-219ENST00000584550 PSMB3P49720 205 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 MEOX2P50222 304 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 MORN5Q5VZ52 161 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 Q6ZNX1 250 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 OR1L4Q8NGR5 311 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 SCGB1C1Q8TD33 95 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 C17orf77Q96MU5 243 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 DNAH5Q8TE73 4624 aa7.3□□□□□ -1.24
GGA3-219ENST00000584550 AGRNO00468 2067 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 FXYD6-FXYD2A0A087WZ82 144 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 F6UB75 175 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 ISLRO14498 428 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 PRB4P10163 310 aaPredicted RBP7.29□□□□□ -1.24
GGA3-219ENST00000584550 GCSAMLQ5JQS6 135 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 TRPT1Q86TN4 253 aaKnown RBP7.29□□□□□ -1.24
GGA3-219ENST00000584550 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 OR4B1Q8NGF8 309 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 C20orf173Q96LM9 149 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 PFDN5Q99471 154 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 WDR61Q9GZS3 305 aaKnown RBP7.29□□□□□ -1.24
GGA3-219ENST00000584550 WFDC1Q9HC57 220 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 SEPSECSQ9HD40 501 aaKnown RBP7.29□□□□□ -1.24
GGA3-219ENST00000584550 RNF24Q9Y225 148 aa7.29□□□□□ -1.24
GGA3-219ENST00000584550 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
GGA3-219ENST00000584550 ZNF705EA8MWA4 302 aaPredicted RBP7.28□□□□□ -1.24
GGA3-219ENST00000584550 C17orf112F2Z3M2 114 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 H3BMM0 161 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 C4BPBP20851 252 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 FXYD7P58549 80 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 GDF5OSQ5U4N7 250 aa7.28□□□□□ -1.24
GGA3-219ENST00000584550 SAMD13Q5VXD3 122 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms