RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GGCTO75223 188 aaKnown RBP0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 KLF7O75840 302 aaPredicted RBP0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 CYBAP13498 195 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 HSD11B1P28845 292 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 TAF1AQ15573 450 aaPredicted RBP0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 EIF5AL1Q6IS14 154 aaKnown RBP0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 C4orf22Q6V702 233 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 GKN2Q86XP6 184 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 OR5D14Q8NGL3 314 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 OR10K1Q8NGX5 313 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 CANT1Q8WVQ1 401 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 CHMP6Q96FZ7 201 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 LINC00052Q96N35 136 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 TAS2R7Q9NYW3 318 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 ORMDL1Q9P0S3 153 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 PCTPQ9UKL6 214 aa0.28□□□□□ -2.36
SMCHD1-207ENST00000581711 CITO14578 2027 aa0.28□□□□□ -2.37
SMCHD1-207ENST00000581711 ARHGEF11O15085 1522 aa0.28□□□□□ -2.37
SMCHD1-207ENST00000581711 LAMA3Q16787 3333 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 FANCMQ8IYD8 2048 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 IGLV3-32A0A0A0MS00 114 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 TRAV10A0A0B4J240 114 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 A0A1W2PPM0 123 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 E7EUB6 86 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 C17orf112F2Z3M2 114 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 F8W1H4 67 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 H3BRM9 83 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 TMEM256-PLSCR3K7ERE1 68 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 M0R378 163 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 AIPO00170 330 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ATP5HO75947 161 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ERC2-IT1O76042 136 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 NDUFC2O95298 119 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 CD2P06729 351 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 FREM3P0C091 2139 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 OR10J4P0C629 311 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 HLA-EP13747 358 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 DSCR4P56555 118 aaPredicted RBP0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ROMO1P60602 79 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 NCALDP61601 193 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 CDK6Q00534 326 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ZNF833PQ6ZTB9 187 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 S100A7AQ86SG5 101 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 TEN1Q86WV5 123 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 PLPP5Q8NEB5 264 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ZNF431Q8TF32 576 aaPredicted RBP0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 CEP19Q96LK0 163 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 TEX37Q96LM6 180 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 NPCDR1Q9BY65 106 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 PBOV1Q9GZY1 135 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ARMC1Q9NVT9 282 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 PYCARDQ9ULZ3 195 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 TNFSF18Q9UNG2 199 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 ARL5AQ9Y689 179 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 CACNA1HO95180 2353 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 MIA2Q96PC5 1412 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 GVINP1Q7Z2Y8 2422 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 CAMSAP1Q5T5Y3 1602 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 OTOGQ6ZRI0 2925 aa0.27□□□□□ -2.37
SMCHD1-207ENST00000581711 MYH3P11055 1940 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 DUXBA0A1W2PPF3 345 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 OR2T8A6NH00 312 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 G3V2T6 193 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 M0R233 179 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 BANF1O75531 89 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 C1QBP02746 253 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 CXCL8P10145 99 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 NFYBP25208 207 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 CAPZBP47756 277 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 RAB5CP51148 216 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 DYNLT3P51808 116 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 MRPS15P82914 257 aaKnown RBP0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 SCGB2B2Q4G0G5 96 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 C1orf134Q5TEV5 83 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 HAGHLQ6PII5 290 aaPredicted RBP0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 IFT20Q8IY31 132 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 PXT1Q8NFP0 134 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 OR5D16Q8NGK9 328 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 OR4K15Q8NH41 348 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 MUCL1Q96DR8 90 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 PSTPIP2Q9H939 334 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 POPDC3Q9HBV1 291 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 TMEM138Q9NPI0 162 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 OR52A1Q9UKL2 312 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 ADGRL3Q9HAR2 1447 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 CECR2Q9BXF3 1484 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 N4BP2Q86UW6 1770 aaPredicted RBP0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 MGAMO43451 1857 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 ZGRF1Q86YA3 2104 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 PKD1L1Q8TDX9 2849 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 PCNTO95613 3336 aa0.26□□□□□ -2.37
SMCHD1-207ENST00000581711 SPTBP11277 2137 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 TET1Q8NFU7 2136 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PTPRDP23468 1912 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 UHRF1BP1Q6BDS2 1440 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 A0A087WSZ3 146 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 B4DSR2 109 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 H7C1C5 153 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 ATG12O94817 140 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms