RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 H3BTX0 84 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 CNN1P51911 297 aaKnown RBP12□□□□□ -0.49
SREBF1-219ENST00000580540 EMP1P54849 157 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 NHLH2Q02577 135 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 OPCMLQ14982 345 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 VWC2Q2TAL6 325 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 MORN5Q5VZ52 161 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 ZNF767PQ75MW2 155 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 BPIFA4PQ86YQ2 179 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 LINC00476Q8WZB0 136 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 SLC25A31Q9H0C2 315 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 SLC39A9Q9NUM3 307 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 GOLT1BQ9Y3E0 138 aa12□□□□□ -0.49
SREBF1-219ENST00000580540 TRAV5A0A0B4J249 113 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
SREBF1-219ENST00000580540 CXCL3P19876 107 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 B2MP61769 119 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 RHOBP62745 196 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PRR20EP86478 221 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PRR20CP86479 221 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PRR20DP86480 221 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PRR20BP86481 221 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PRR20AP86496 221 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 HIST1H1AQ02539 215 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PSG3Q16557 428 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-219ENST00000580540 OR5C1Q8NGR4 320 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 HRH4Q9H3N8 390 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PPP1R14DQ9NXH3 145 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 PXMP4Q9Y6I8 212 aa11.99□□□□□ -0.49
SREBF1-219ENST00000580540 H0YIZ8 118 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 RPL29P47914 159 aaKnown RBP11.98□□□□□ -0.49
SREBF1-219ENST00000580540 H2BFSP57053 126 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 CLINT1Q14677 625 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 SPINK13Q1W4C9 94 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 LCN15Q6UWW0 184 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 Q6ZTC4 211 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 THAP6Q8TBB0 222 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 C2CD4CQ8TF44 421 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 PFDN5Q99471 154 aa11.98□□□□□ -0.49
SREBF1-219ENST00000580540 SMIM9A6NGZ8 99 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 ZNF705FA8MVS1 300 aaPredicted RBP11.97□□□□□ -0.49
SREBF1-219ENST00000580540 IGLL5B9A064 214 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 M0R2Z0 102 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 AMTNQ6UX39 209 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 C1orf158Q8N1D5 194 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 OR11H7Q8NGC8 314 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 OR8A1Q8NGG7 326 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
SREBF1-219ENST00000580540 NEU1Q99519 415 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
SREBF1-219ENST00000580540 C11orf94C9JXX5 98 aa11.96□□□□□ -0.49
SREBF1-219ENST00000580540 HBE1P02100 147 aa11.96□□□□□ -0.49
SREBF1-219ENST00000580540 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
SREBF1-219ENST00000580540 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.49
SREBF1-219ENST00000580540 NPCDR1Q9BY65 106 aa11.96□□□□□ -0.49
SREBF1-219ENST00000580540 ZNF331Q9NQX6 463 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-219ENST00000580540 TRAV10A0A0B4J240 114 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 A8MTW9 85 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 H3BQ15 152 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 SLC17A3O00476 420 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 MPDU1O75352 247 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 AMBPP02760 352 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 CXCL2P19875 107 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 C12orf74Q32Q52 190 aa11.95□□□□□ -0.5
SREBF1-219ENST00000580540 TRAV12-2A0A075B6T6 113 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 BOLA2-SMG1P6H3BVE0 249 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 MPC2O95563 127 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 INSP01308 110 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 SPART-AS1P0CW21 52 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 GCSAMLQ5JQS6 135 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 CHAC2Q8WUX2 184 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 RNF126Q9BV68 326 aa11.94□□□□□ -0.5
SREBF1-219ENST00000580540 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
SREBF1-219ENST00000580540 PET100P0DJ07 73 aa11.93□□□□□ -0.5
SREBF1-219ENST00000580540 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
SREBF1-219ENST00000580540 ALG5Q9Y673 324 aa11.93□□□□□ -0.5
SREBF1-219ENST00000580540 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-219ENST00000580540 PRAC2D3DTV9 90 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-219ENST00000580540 PRM2P04554 102 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 GUK1Q16774 197 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 ZNF586Q9NXT0 402 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
SREBF1-219ENST00000580540 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
SREBF1-219ENST00000580540 BLNKQ8WV28 456 aa11.91□□□□□ -0.5
SREBF1-219ENST00000580540 SAT2Q96F10 170 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-219ENST00000580540 LINC01587Q99440 93 aa11.91□□□□□ -0.5
SREBF1-219ENST00000580540 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
SREBF1-219ENST00000580540 MBD2Q9UBB5 411 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 598.5 ms