RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 FHL3Q13643 280 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 SIGLEC15Q6ZMC9 328 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 OR9G4Q8NGQ1 327 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 ZNF414Q96IQ9 312 aa10.61□□□□□ -0.71
CSNK1D-209ENST00000578904 A0A087X0K7 114 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 C2orf70A6NJV1 201 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 FAM74A7A6NL05 159 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 CHEK1O14757 476 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 IGLC2P0DOY2 106 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 RPL11P62913 178 aaKnown RBP10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 RXFP4Q8TDU9 374 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 SLC35B3Q9H1N7 401 aa10.6□□□□□ -0.71
CSNK1D-209ENST00000578904 TRBV19A0A075B6N1 114 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 TMEM213A2RRL7 107 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 KRBOX1C9JBD0 128 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 OVOL1O14753 267 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 CBLN1P23435 193 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 ICAM4Q14773 271 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 CMTM2Q8TAZ6 248 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 DYNLRB2Q8TF09 96 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 GLMPQ8WWB7 406 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 DLX4Q92988 240 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 RPUSD4Q96CM3 377 aaKnown RBP10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 RARRES2Q99969 163 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 OTORQ9NRC9 128 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
CSNK1D-209ENST00000578904 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 MRPS12O15235 138 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 APOHP02749 345 aaPredicted RBP10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 FOLR2P14207 255 aa10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 S100A1P23297 94 aa10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 CSN1S1P47710 185 aa10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 RANP62826 216 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 SUMO1P63165 101 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 LINC00482Q8N8I6 264 aa10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 ZNF586Q9NXT0 402 aa10.58□□□□□ -0.72
CSNK1D-209ENST00000578904 IGHV3OR16-13A0A075B7E8 117 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 IGHV3-74A0A0B4J1X5 117 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 PGPA6NDG6 321 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 K7EQM0 130 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 CD33P20138 364 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 ID1P41134 155 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 C5orf17Q8NAS9 161 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 Q9H3A6 140 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 TRRAPQ9Y4A5 3859 aa10.57□□□□□ -0.72
CSNK1D-209ENST00000578904 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 TMEM218A2RU14 115 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 H3BQ15 152 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 DNASE2O00115 360 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 SLC25A5P05141 298 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 FAM74A3Q4VXF1 159 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 SOHLH1Q5JUK2 328 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 PRR31Q5SQ13 230 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 C16orf92Q96LL3 132 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 YTHDF2Q9Y5A9 579 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-209ENST00000578904 S100A9P06702 114 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-209ENST00000578904 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-209ENST00000578904 SFTA3P0C7M3 94 aa10.55□□□□□ -0.72
CSNK1D-209ENST00000578904 ATP5G3P48201 142 aa10.55□□□□□ -0.72
CSNK1D-209ENST00000578904 CD81P60033 236 aa10.55□□□□□ -0.72
CSNK1D-209ENST00000578904 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-209ENST00000578904 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 FBLL1A6NHQ2 334 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 F8W036 122 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 ATP6V1G1O75348 118 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 CSN3P07498 182 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 CEBPGP53567 150 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 CCDC28AQ8IWP9 274 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 MRPL53Q96EL3 112 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 SEC11CQ9BY50 192 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 ZNF331Q9NQX6 463 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 MLXQ9UH92 298 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 SMAD5-AS1Q9Y6J3 95 aa10.54□□□□□ -0.72
CSNK1D-209ENST00000578904 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 GGTLC3B5MD39 225 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 ISLRO14498 428 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 NDUFB4O95168 129 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 SNRPCP09234 159 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 AKR1C3P42330 323 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 CNN1P51911 297 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 SNRPD3P62318 126 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 SRSF3P84103 164 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 C11orf52Q96A22 123 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 ATG101Q9BSB4 218 aa10.53□□□□□ -0.72
CSNK1D-209ENST00000578904 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms