RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 EBLN2Q6P2I7 272 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 THAP6Q8TBB0 222 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 LRRC20Q8TCA0 184 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
VAPA-204ENST00000577901 SLC39A9Q9NUM3 307 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 HLA-DRB4X5D2U9 266 aa11.65□□□□□ -0.54
VAPA-204ENST00000577901 RPL12P30050 165 aaKnown RBP11.64□□□□□ -0.55
VAPA-204ENST00000577901 CLINT1Q14677 625 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 ZNF709Q8N972 641 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 OR11H2Q8NH07 326 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 NPCDR1Q9BY65 106 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
VAPA-204ENST00000577901 PXMP4Q9Y6I8 212 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
VAPA-204ENST00000577901 A0A087X0K7 114 aa11.63□□□□□ -0.55
VAPA-204ENST00000577901 FCN2Q15485 313 aa11.63□□□□□ -0.55
VAPA-204ENST00000577901 C17orf77Q96MU5 243 aa11.63□□□□□ -0.55
VAPA-204ENST00000577901 MBD2Q9UBB5 411 aa11.63□□□□□ -0.55
VAPA-204ENST00000577901 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
VAPA-204ENST00000577901 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 GIG44P09565 113 aaPredicted RBP11.62□□□□□ -0.55
VAPA-204ENST00000577901 C4BPBP20851 252 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 GDF5OSQ5U4N7 250 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 OR11H7Q8NGC8 314 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 OR4B1Q8NGF8 309 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 ASB13Q8WXK3 278 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 ATP5SQ99766 215 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 WDR61Q9GZS3 305 aaKnown RBP11.62□□□□□ -0.55
VAPA-204ENST00000577901 KCNIP2Q9NS61 270 aa11.62□□□□□ -0.55
VAPA-204ENST00000577901 MRPS12O15235 138 aaKnown RBP11.61□□□□□ -0.55
VAPA-204ENST00000577901 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
VAPA-204ENST00000577901 CXCL2P19875 107 aa11.61□□□□□ -0.55
VAPA-204ENST00000577901 DEFB1P60022 68 aa11.61□□□□□ -0.55
VAPA-204ENST00000577901 SCGB1C1Q8TD33 95 aa11.61□□□□□ -0.55
VAPA-204ENST00000577901 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 A0A0J9YX75 114 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 F6UB75 175 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 DEFB4AO15263 64 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 IFNA5P01569 189 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 TCTAP57738 103 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 OXA1LQ15070 435 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 FAM78BQ5VT40 261 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 LCN15Q6UWW0 184 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 RNF182Q8N6D2 247 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 ZNF738Q8NE65 137 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 SLC50A1Q9BRV3 221 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 CLEC5AQ9NY25 188 aa11.6□□□□□ -0.55
VAPA-204ENST00000577901 AGRNO00468 2067 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 TRAV5A0A0B4J249 113 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 DUSP14O95147 198 aaKnown RBP11.59□□□□□ -0.55
VAPA-204ENST00000577901 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
VAPA-204ENST00000577901 PSG9Q00887 426 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 GUK1Q16774 197 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 MORN5Q5VZ52 161 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 CSNK1G2-AS1Q8NCQ2 148 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 SMIM3Q9BZL3 60 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 XCL2Q9UBD3 114 aa11.59□□□□□ -0.55
VAPA-204ENST00000577901 IGLC2P0DOY2 106 aa11.58□□□□□ -0.56
VAPA-204ENST00000577901 PSG3Q16557 428 aa11.58□□□□□ -0.56
VAPA-204ENST00000577901 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
VAPA-204ENST00000577901 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
VAPA-204ENST00000577901 FAT2Q9NYQ8 4349 aa11.57□□□□□ -0.56
VAPA-204ENST00000577901 ZNF705EA8MWA4 302 aaPredicted RBP11.57□□□□□ -0.56
VAPA-204ENST00000577901 IGLL5B9A064 214 aa11.57□□□□□ -0.56
VAPA-204ENST00000577901 SNRPCP09234 159 aaKnown RBP11.57□□□□□ -0.56
VAPA-204ENST00000577901 MIFP14174 115 aa11.57□□□□□ -0.56
VAPA-204ENST00000577901 FXYD7P58549 80 aa11.57□□□□□ -0.56
VAPA-204ENST00000577901 TMEM14CQ9P0S9 112 aa11.57□□□□□ -0.56
VAPA-204ENST00000577901 H3BQ15 152 aa11.56□□□□□ -0.56
VAPA-204ENST00000577901 RYR1P21817 5038 aa11.56□□□□□ -0.56
VAPA-204ENST00000577901 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
VAPA-204ENST00000577901 CNN1P51911 297 aaKnown RBP11.56□□□□□ -0.56
VAPA-204ENST00000577901 GCSAMLQ5JQS6 135 aa11.56□□□□□ -0.56
VAPA-204ENST00000577901 PARD6GQ9BYG4 376 aaPredicted RBP11.56□□□□□ -0.56
VAPA-204ENST00000577901 SLC35B3Q9H1N7 401 aa11.56□□□□□ -0.56
VAPA-204ENST00000577901 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
VAPA-204ENST00000577901 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 H3BTX0 84 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 AMBPP02760 352 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 Q8NAQ8 132 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 RPUSD4Q96CM3 377 aaKnown RBP11.55□□□□□ -0.56
VAPA-204ENST00000577901 SAT2Q96F10 170 aaPredicted RBP11.55□□□□□ -0.56
VAPA-204ENST00000577901 MRPL32Q9BYC8 188 aaKnown RBP11.55□□□□□ -0.56
VAPA-204ENST00000577901 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 X6R8D5 127 aa11.55□□□□□ -0.56
VAPA-204ENST00000577901 A8MTW9 85 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 ZNF253O75346 499 aa11.54□□□□□ -0.56
VAPA-204ENST00000577901 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
VAPA-204ENST00000577901 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
VAPA-204ENST00000577901 HIST1H1EP10412 219 aaKnown RBP11.54□□□□□ -0.56
VAPA-204ENST00000577901 RHOBP62745 196 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms