RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 MUC7Q8TAX7 377 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 LRRC20Q8TCA0 184 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 LINC00052Q96N35 136 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 ZNF471Q9BX82 626 aaPredicted RBP8.15□□□□□ -1.1
CHD3-216ENST00000573936 MRPL32Q9BYC8 188 aaKnown RBP8.15□□□□□ -1.1
CHD3-216ENST00000573936 TIMM9Q9Y5J7 89 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 RFNGQ9Y644 331 aa8.15□□□□□ -1.1
CHD3-216ENST00000573936 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.11
CHD3-216ENST00000573936 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.11
CHD3-216ENST00000573936 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
CHD3-216ENST00000573936 RPL35AP18077 110 aaKnown RBP8.14□□□□□ -1.11
CHD3-216ENST00000573936 ZNF124Q15973 351 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 GUK1Q16774 197 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 ACOT6Q3I5F7 207 aaPredicted RBP8.14□□□□□ -1.11
CHD3-216ENST00000573936 FFAR4Q5NUL3 377 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 STOML3Q8TAV4 291 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 CSTL1Q9H114 145 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 CLEC5AQ9NY25 188 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 DNAH1Q9P2D7 4330 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
CHD3-216ENST00000573936 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 MRPS12O15235 138 aaKnown RBP8.13□□□□□ -1.11
CHD3-216ENST00000573936 SPP1P10451 314 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 C4BPBP20851 252 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 ATP6V0CP27449 155 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 ACTL10Q5JWF8 245 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 EBLN2Q6P2I7 272 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 MORN3Q6PF18 240 aaPredicted RBP8.13□□□□□ -1.11
CHD3-216ENST00000573936 LCN15Q6UWW0 184 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 FOXI2Q6ZQN5 318 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 Q6ZWC4 215 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 SLC51BQ86UW2 128 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 RCHY1Q96PM5 261 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 SLC50A1Q9BRV3 221 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 SH3BGRL3Q9H299 93 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 HRH4Q9H3N8 390 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 TP53TG1Q9Y2A0 90 aa8.13□□□□□ -1.11
CHD3-216ENST00000573936 EPPK1P58107 5090 aaKnown RBP8.13□□□□□ -1.11
CHD3-216ENST00000573936 TRAV5A0A0B4J249 113 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 MBP02144 154 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 TPT1P13693 172 aaKnown RBP8.12□□□□□ -1.11
CHD3-216ENST00000573936 HLA-DRB4P13762 266 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 M6PRP20645 277 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 NUTF2P61970 127 aaKnown RBP8.12□□□□□ -1.11
CHD3-216ENST00000573936 RHOBP62745 196 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 SERF2P84101 59 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 MORN5Q5VZ52 161 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 TRPT1Q86TN4 253 aaKnown RBP8.12□□□□□ -1.11
CHD3-216ENST00000573936 BAP18Q8IXM2 172 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 GNPNAT1Q96EK6 184 aaPredicted RBP8.12□□□□□ -1.11
CHD3-216ENST00000573936 C17orf77Q96MU5 243 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 PSMG3Q9BT73 122 aaPredicted RBP8.12□□□□□ -1.11
CHD3-216ENST00000573936 SAV1Q9H4B6 383 aaPredicted RBP8.12□□□□□ -1.11
CHD3-216ENST00000573936 FUT9Q9Y231 359 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 HLA-DRB4X5D2U9 266 aa8.12□□□□□ -1.11
CHD3-216ENST00000573936 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 H3BMM0 161 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 ZNF253O75346 499 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 IGLC2P0DOY2 106 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 HIST1H1EP10412 219 aaKnown RBP8.11□□□□□ -1.11
CHD3-216ENST00000573936 TAS2R45P59539 299 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 EIF5AP63241 154 aaKnown RBP8.11□□□□□ -1.11
CHD3-216ENST00000573936 GCSAMLQ5JQS6 135 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 OR51M1Q9H341 326 aa8.11□□□□□ -1.11
CHD3-216ENST00000573936 ZNF331Q9NQX6 463 aaPredicted RBP8.11□□□□□ -1.11
CHD3-216ENST00000573936 TRAV8-2A0A0B4J237 113 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 SPRY2O43597 315 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
CHD3-216ENST00000573936 CA1P00915 261 aaPredicted RBP8.1□□□□□ -1.11
CHD3-216ENST00000573936 PSG9Q00887 426 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 PDE6HQ13956 83 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 PSG3Q16557 428 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 MIR17HGQ75NE6 70 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 TMED6Q8WW62 240 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 RNF183Q96D59 192 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 PAXXQ9BUH6 204 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 SLC25A2Q9BXI2 301 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 C1QTNF4Q9BXJ3 329 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 PLA2G2EQ9NZK7 142 aa8.1□□□□□ -1.11
CHD3-216ENST00000573936 TRBV19A0A075B6N1 114 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 A0A0J9YX75 114 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 H3BQ15 152 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 SEC11BP0C7V7 166 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 OR10G4Q8NGN3 311 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 OR10G9Q8NGN4 311 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 OR10G7Q8NGN6 311 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 SAT2Q96F10 170 aaPredicted RBP8.09□□□□□ -1.11
CHD3-216ENST00000573936 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 OVOL2Q9BRP0 275 aa8.09□□□□□ -1.11
CHD3-216ENST00000573936 ZNF586Q9NXT0 402 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms