RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ZNF846Q147U1 533 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 FAM222AQ5U5X8 452 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 LYRM2Q9NU23 88 aaPredicted RBP12.4□□□□□ -0.42
SMG6-214ENST00000573827 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 WDR83OSQ9Y284 106 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 GOLT1BQ9Y3E0 138 aa12.4□□□□□ -0.42
SMG6-214ENST00000573827 FAM240BA0A1B0GVZ2 78 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 IGSF23A1L1A6 192 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 C5orf51A6NDU8 294 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 GOSR2O14653 212 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 DUSP14O95147 198 aaKnown RBP12.39□□□□□ -0.43
SMG6-214ENST00000573827 PRM2P04554 102 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 PSG3Q16557 428 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 SPINK13Q1W4C9 94 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 OR8A1Q8NGG7 326 aa12.39□□□□□ -0.43
SMG6-214ENST00000573827 LOC102723971A0A1B0GUV8 181 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 PLAC8L1A1L4L8 177 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 L7N2F9 121 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 HBE1P02100 147 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 IGLC2P0DOY2 106 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
SMG6-214ENST00000573827 CAV2P51636 162 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 VAMP2P63027 116 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 RAB32Q13637 225 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 OPCMLQ14982 345 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 OXA1LQ15070 435 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 TMEM252Q8N6L7 170 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 ZNF738Q8NE65 137 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 S100ZQ8WXG8 99 aa12.38□□□□□ -0.43
SMG6-214ENST00000573827 ZNF331Q9NQX6 463 aaPredicted RBP12.38□□□□□ -0.43
SMG6-214ENST00000573827 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
SMG6-214ENST00000573827 SLC17A3O00476 420 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 CXCL2P19875 107 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 CAMLGP49069 296 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 SULT1A1P50225 295 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 NRARPQ7Z6K4 114 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 BAP18Q8IXM2 172 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 CHAC2Q8WUX2 184 aa12.37□□□□□ -0.43
SMG6-214ENST00000573827 H3BQ15 152 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 BOLA2-SMG1P6H3BVE0 249 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 UPK1BO75841 260 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 SNRPCP09234 159 aaKnown RBP12.36□□□□□ -0.43
SMG6-214ENST00000573827 BCAP31P51572 246 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 RRN3P1Q2M238 152 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 MZT2BQ6NZ67 158 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 S100A7AQ86SG5 101 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 RPUSD4Q96CM3 377 aaKnown RBP12.36□□□□□ -0.43
SMG6-214ENST00000573827 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
SMG6-214ENST00000573827 NIPSNAP3BQ9BS92 247 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
SMG6-214ENST00000573827 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 TEX48A0A1B0GUV7 120 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 PRAC2D3DTV9 90 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 COX7A2P2O60397 106 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 INSP01308 110 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
SMG6-214ENST00000573827 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 DNAJC4Q9NNZ3 241 aa12.35□□□□□ -0.43
SMG6-214ENST00000573827 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
SMG6-214ENST00000573827 H3BTX0 84 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 AZU1P20160 251 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 TSPOP30536 169 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
SMG6-214ENST00000573827 S100A10P60903 97 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 C10orf113Q5VZT2 155 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 BPIFA4PQ86YQ2 179 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 RNF24Q9Y225 148 aa12.34□□□□□ -0.43
SMG6-214ENST00000573827 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 H0YIZ8 118 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 S100A11P31949 105 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 KIR3DS1Q14943 382 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 FAM210BQ96KR6 192 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 SLC39A9Q9NUM3 307 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 PTTG2Q9NZH5 202 aa12.33□□□□□ -0.44
SMG6-214ENST00000573827 SIX6O95475 246 aa12.32□□□□□ -0.44
SMG6-214ENST00000573827 PVALBP20472 110 aaPredicted RBP12.32□□□□□ -0.44
SMG6-214ENST00000573827 POM121L12Q8N7R1 296 aa12.32□□□□□ -0.44
SMG6-214ENST00000573827 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
SMG6-214ENST00000573827 B2MP61769 119 aa12.31□□□□□ -0.44
SMG6-214ENST00000573827 RAB31Q13636 194 aa12.31□□□□□ -0.44
SMG6-214ENST00000573827 Q6ZRG5 221 aa12.31□□□□□ -0.44
SMG6-214ENST00000573827 ZNF586Q9NXT0 402 aa12.31□□□□□ -0.44
SMG6-214ENST00000573827 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 P0DMU3 169 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 RHOBP62745 196 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 HBG1P69891 147 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 HBG2P69892 147 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 NHLH2Q02577 135 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 ATP6V1FQ16864 119 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 STX12Q86Y82 276 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 OR1L4Q8NGR5 311 aa12.3□□□□□ -0.44
SMG6-214ENST00000573827 ENKURQ8TC29 256 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms