RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CXorf65A6NEN9 183 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 H3BTX0 84 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 HLA-DMBP28068 263 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 PSG9Q00887 426 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 LCN15Q6UWW0 184 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 CLUHP3Q96NS8 147 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 ATP5SQ99766 215 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 SMIM3Q9BZL3 60 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 WDR61Q9GZS3 305 aaKnown RBP15.02■□□□□ -0
CHMP6-204ENST00000572778 SLC35B3Q9H1N7 401 aa15.02■□□□□ -0
CHMP6-204ENST00000572778 ZNF705EA8MWA4 302 aaPredicted RBP15.01□□□□□ -0.01
CHMP6-204ENST00000572778 PSG3Q16557 428 aa15.01□□□□□ -0.01
CHMP6-204ENST00000572778 GCSAMLQ5JQS6 135 aa15.01□□□□□ -0.01
CHMP6-204ENST00000572778 C11orf68Q9H3H3 251 aaKnown RBP15.01□□□□□ -0.01
CHMP6-204ENST00000572778 DUSP14O95147 198 aaKnown RBP15□□□□□ -0.01
CHMP6-204ENST00000572778 ZNF705DP0CH99 300 aaPredicted RBP15□□□□□ -0.01
CHMP6-204ENST00000572778 ZNF705BP0CI00 300 aaPredicted RBP15□□□□□ -0.01
CHMP6-204ENST00000572778 CXCL2P19875 107 aa15□□□□□ -0.01
CHMP6-204ENST00000572778 ZNF331Q9NQX6 463 aaPredicted RBP15□□□□□ -0.01
CHMP6-204ENST00000572778 X6R8D5 127 aa15□□□□□ -0.01
CHMP6-204ENST00000572778 IGHV4-28A0A0C4DH34 117 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 C17orf112F2Z3M2 114 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 H3BQ15 152 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 IFNA5P01569 189 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 IGLC2P0DOY2 106 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 PRB4P10163 310 aaPredicted RBP14.99□□□□□ -0.01
CHMP6-204ENST00000572778 MIFP14174 115 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 CNN1P51911 297 aaKnown RBP14.99□□□□□ -0.01
CHMP6-204ENST00000572778 Q8NAQ8 132 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 SCGB1C1Q8TD33 95 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 SLC50A1Q9BRV3 221 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 MFFQ9GZY8 342 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 HRH4Q9H3N8 390 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 KCNIP2Q9NS61 270 aa14.99□□□□□ -0.01
CHMP6-204ENST00000572778 STARD9Q9P2P6 4700 aa14.98□□□□□ -0.01
CHMP6-204ENST00000572778 IGHV3OR16-12A0A075B7B8 117 aa14.98□□□□□ -0.01
CHMP6-204ENST00000572778 SLC17A3O00476 420 aa14.97□□□□□ -0.01
CHMP6-204ENST00000572778 RBMY1A1P0DJD3 496 aaKnown RBP14.97□□□□□ -0.01
CHMP6-204ENST00000572778 RBMY1CP0DJD4 496 aa14.97□□□□□ -0.01
CHMP6-204ENST00000572778 HIST1H1AQ02539 215 aaPredicted RBP14.97□□□□□ -0.01
CHMP6-204ENST00000572778 RBMY1FQ15415 496 aaKnown RBP14.97□□□□□ -0.01
CHMP6-204ENST00000572778 OR8A1Q8NGG7 326 aa14.97□□□□□ -0.01
CHMP6-204ENST00000572778 C11orf45Q8TAV5 145 aa14.97□□□□□ -0.01
CHMP6-204ENST00000572778 RPUSD4Q96CM3 377 aaKnown RBP14.97□□□□□ -0.01
CHMP6-204ENST00000572778 NANOS2P60321 138 aaKnown RBP14.96□□□□□ -0.01
CHMP6-204ENST00000572778 OXA1LQ15070 435 aa14.96□□□□□ -0.01
CHMP6-204ENST00000572778 GUK1Q16774 197 aa14.96□□□□□ -0.01
CHMP6-204ENST00000572778 AMTNQ6UX39 209 aa14.96□□□□□ -0.01
CHMP6-204ENST00000572778 SAT2Q96F10 170 aaPredicted RBP14.96□□□□□ -0.01
CHMP6-204ENST00000572778 CSMD3Q7Z407 3707 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 A8MTW9 85 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 GIPP09681 153 aaPredicted RBP14.95□□□□□ -0.02
CHMP6-204ENST00000572778 RHOBP62745 196 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 WFDC1Q9HC57 220 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 PPP1R14DQ9NXH3 145 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 ZNF586Q9NXT0 402 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 TMEM14CQ9P0S9 112 aa14.95□□□□□ -0.02
CHMP6-204ENST00000572778 NUPR2A6NF83 97 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 ZNF705FA8MVS1 300 aaPredicted RBP14.94□□□□□ -0.02
CHMP6-204ENST00000572778 PYYP10082 97 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 SPINK13Q1W4C9 94 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 Q5BKY6 102 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 FFAR4Q5NUL3 377 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 ZNF705AQ6ZN79 300 aaPredicted RBP14.94□□□□□ -0.02
CHMP6-204ENST00000572778 MIR17HGQ75NE6 70 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 GOLT1BQ9Y3E0 138 aa14.94□□□□□ -0.02
CHMP6-204ENST00000572778 M0R2Z0 102 aa14.93□□□□□ -0.02
CHMP6-204ENST00000572778 AMBPP02760 352 aa14.93□□□□□ -0.02
CHMP6-204ENST00000572778 HIST1H1EP10412 219 aaKnown RBP14.93□□□□□ -0.02
CHMP6-204ENST00000572778 CEMP1Q6PRD7 247 aaPredicted RBP14.93□□□□□ -0.02
CHMP6-204ENST00000572778 PHLDA1Q8WV24 401 aaPredicted RBP14.93□□□□□ -0.02
CHMP6-204ENST00000572778 ASB13Q8WXK3 278 aa14.93□□□□□ -0.02
CHMP6-204ENST00000572778 SLC25A2Q9BXI2 301 aa14.93□□□□□ -0.02
CHMP6-204ENST00000572778 TRBV19A0A075B6N1 114 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 C1orf158Q8N1D5 194 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 BLNKQ8WV28 456 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 IGF2BP2-AS1Q96M15 143 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 NEU1Q99519 415 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 MRPL32Q9BYC8 188 aaKnown RBP14.92□□□□□ -0.02
CHMP6-204ENST00000572778 FUT9Q9Y231 359 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 TIMM9Q9Y5J7 89 aa14.92□□□□□ -0.02
CHMP6-204ENST00000572778 PRAC2D3DTV9 90 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 BOLA2-SMG1P6H3BVE0 249 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 ZNF253O75346 499 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 OR10J6PQ8NGY7 276 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 FAM167A-AS1Q96KT0 104 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 TMEM208Q9BTX3 173 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 PARD6GQ9BYG4 376 aaPredicted RBP14.91□□□□□ -0.02
CHMP6-204ENST00000572778 RFNGQ9Y644 331 aa14.91□□□□□ -0.02
CHMP6-204ENST00000572778 DYNC2H1Q8NCM8 4307 aaKnown RBP14.91□□□□□ -0.02
CHMP6-204ENST00000572778 LCE6AA0A183 80 aa14.9□□□□□ -0.02
CHMP6-204ENST00000572778 SMIM9A6NGZ8 99 aa14.9□□□□□ -0.02
CHMP6-204ENST00000572778 AQP10Q96PS8 301 aa14.9□□□□□ -0.02
CHMP6-204ENST00000572778 OR51M1Q9H341 326 aa14.9□□□□□ -0.02
CHMP6-204ENST00000572778 KLK5Q9Y337 293 aaPredicted RBP14.9□□□□□ -0.02
CHMP6-204ENST00000572778 TRAV12-2A0A075B6T6 113 aa14.89□□□□□ -0.03
CHMP6-204ENST00000572778 JTBO76095 146 aa14.89□□□□□ -0.03
CHMP6-204ENST00000572778 INSP01308 110 aa14.89□□□□□ -0.03
CHMP6-204ENST00000572778 EMP1P54849 157 aa14.89□□□□□ -0.03
CHMP6-204ENST00000572778 BAP18Q8IXM2 172 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms