RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 C5orf51A6NDU8 294 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 FAM24AA6NFZ4 105 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 M0R2Z0 102 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 SLC17A3O00476 420 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 CST7O76096 145 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 CXCL2P19875 107 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 S100A7P31151 101 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 CAV2P51636 162 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 RAB32Q13637 225 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 OPCMLQ14982 345 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 SPINK13Q1W4C9 94 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 FAM222AQ5U5X8 452 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 LINC00305Q7Z4B0 112 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 BAP18Q8IXM2 172 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 TMEM252Q8N6L7 170 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 ZNF738Q8NE65 137 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 OR8A1Q8NGG7 326 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 ZNF331Q9NQX6 463 aaPredicted RBP5.57□□□□□ -1.52
CDH3-209ENST00000569080 PTTG2Q9NZH5 202 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 GOLT1BQ9Y3E0 138 aa5.57□□□□□ -1.52
CDH3-209ENST00000569080 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
CDH3-209ENST00000569080 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 UBE2L5PA0A1B0GUS4 154 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 LOC102723971A0A1B0GUV8 181 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 BOLA2-SMG1P6H3BVE0 249 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 L7N2F9 121 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 GOSR2O14653 212 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 DUSP14O95147 198 aaKnown RBP5.56□□□□□ -1.52
CDH3-209ENST00000569080 INSP01308 110 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 HBE1P02100 147 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 PRM2P04554 102 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 SPART-AS1P0CW21 52 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 PRB4P10163 310 aaPredicted RBP5.56□□□□□ -1.52
CDH3-209ENST00000569080 CAMLGP49069 296 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 SULT1A1P50225 295 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 EMP1P54849 157 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 S100A10P60903 97 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 VAMP2P63027 116 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 FGL1Q08830 312 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 MIC13Q5XKP0 118 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 MZT2BQ6NZ67 158 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 LCN15Q6UWW0 184 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 NRARPQ7Z6K4 114 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 CHAC2Q8WUX2 184 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 UQCC1Q9NVA1 299 aa5.56□□□□□ -1.52
CDH3-209ENST00000569080 YTHDF2Q9Y5A9 579 aaKnown RBP5.56□□□□□ -1.52
CDH3-209ENST00000569080 PKD1P98161 4303 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 TRAV12-2A0A075B6T6 113 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 TEX48A0A1B0GUV7 120 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 H0YIZ8 118 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 H3BQ15 152 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 H3BTX0 84 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 COX7A2P2O60397 106 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 SNRPCP09234 159 aaKnown RBP5.55□□□□□ -1.52
CDH3-209ENST00000569080 TSPOP30536 169 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 RPL29P47914 159 aaKnown RBP5.55□□□□□ -1.52
CDH3-209ENST00000569080 BCAP31P51572 246 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 HIST1H1AQ02539 215 aaPredicted RBP5.55□□□□□ -1.52
CDH3-209ENST00000569080 OXA1LQ15070 435 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 PSG3Q16557 428 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 RRN3P1Q2M238 152 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 S100A7AQ86SG5 101 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 BPIFA4PQ86YQ2 179 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 ENKURQ8TC29 256 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 RPUSD4Q96CM3 377 aaKnown RBP5.55□□□□□ -1.52
CDH3-209ENST00000569080 SAT2Q96F10 170 aaPredicted RBP5.55□□□□□ -1.52
CDH3-209ENST00000569080 SLC50A1Q9BRV3 221 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 NIPSNAP3BQ9BS92 247 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 PLA2G2EQ9NZK7 142 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 RNF24Q9Y225 148 aa5.55□□□□□ -1.52
CDH3-209ENST00000569080 DNAH11Q96DT5 4516 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 TRAV5A0A0B4J249 113 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 ZNF705GA8MUZ8 300 aaPredicted RBP5.54□□□□□ -1.52
CDH3-209ENST00000569080 PRAC2D3DTV9 90 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 SIX6O95475 246 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 PVALBP20472 110 aaPredicted RBP5.54□□□□□ -1.52
CDH3-209ENST00000569080 S100A11P31949 105 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 H2BFSP57053 126 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 B2MP61769 119 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 KIR3DS1Q14943 382 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 C10orf113Q5VZT2 155 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 STX12Q86Y82 276 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 MARVELD1Q9BSK0 173 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 NPCDR1Q9BY65 106 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 SLC39A9Q9NUM3 307 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 OR5AC2Q9NZP5 309 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 PXMP4Q9Y6I8 212 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 RYR1P21817 5038 aa5.54□□□□□ -1.52
CDH3-209ENST00000569080 NACAE9PAV3 2078 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 PRAF2O60831 178 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 ZNF253O75346 499 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 NDUFB4O95168 129 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 AZU1P20160 251 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 FGF7P21781 194 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 CDKN1BP46527 198 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 HBG1P69891 147 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 HBG2P69892 147 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 BAXQ07812 192 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 RAB31Q13636 194 aa5.53□□□□□ -1.52
CDH3-209ENST00000569080 GCSAMLQ5JQS6 135 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms