RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 RLN2P04090 185 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 CXCL3P19876 107 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 S100A11P31949 105 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 EMP1P54849 157 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 OPCMLQ14982 345 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 C10orf113Q5VZT2 155 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 EBLN2Q6P2I7 272 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 STX12Q86Y82 276 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
SF3B3-211ENST00000568291 ZNF709Q8N972 641 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 Q8NAQ8 132 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 OR5C1Q8NGR4 320 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 LRRC20Q8TCA0 184 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 SMIM3Q9BZL3 60 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 NMES1Q9C002 83 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 SLC39A9Q9NUM3 307 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 RFNGQ9Y644 331 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 PRAC2D3DTV9 90 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 M0R2Z0 102 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 SLC17A3O00476 420 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 MRPS12O15235 138 aaKnown RBP6.86□□□□□ -1.31
SF3B3-211ENST00000568291 EIF3GO75821 320 aaKnown RBP eCLIP6.86□□□□□ -1.31
SF3B3-211ENST00000568291 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
SF3B3-211ENST00000568291 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
SF3B3-211ENST00000568291 PSG9Q00887 426 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 VWC2Q2TAL6 325 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 SPATA31B1PQ5VZV4 182 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 ZNF738Q8NE65 137 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 C11orf45Q8TAV5 145 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-211ENST00000568291 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
SF3B3-211ENST00000568291 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 CELA1Q9UNI1 258 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 PXMP4Q9Y6I8 212 aa6.86□□□□□ -1.31
SF3B3-211ENST00000568291 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 ZNF705EA8MWA4 302 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-211ENST00000568291 E5RGE8 158 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 MPC2O95563 127 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 MEOX2P50222 304 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 B2MP61769 119 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 NUTF2P61970 127 aaKnown RBP6.85□□□□□ -1.31
SF3B3-211ENST00000568291 HBG1P69891 147 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 HBG2P69892 147 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 HIST1H1AQ02539 215 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-211ENST00000568291 RAB31Q13636 194 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 FCN2Q15485 313 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 Q6ZRG5 221 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 C1orf158Q8N1D5 194 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 GPR82Q96P67 336 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 PARD6GQ9BYG4 376 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-211ENST00000568291 MBD2Q9UBB5 411 aa6.85□□□□□ -1.31
SF3B3-211ENST00000568291 PYYP10082 97 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
SF3B3-211ENST00000568291 CYCSP99999 105 aaKnown RBP6.84□□□□□ -1.31
SF3B3-211ENST00000568291 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 ATP6V1FQ16864 119 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 Q5BKY6 102 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 AMTNQ6UX39 209 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 BAP18Q8IXM2 172 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 OR11H7Q8NGC8 314 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 RPUSD4Q96CM3 377 aaKnown RBP6.84□□□□□ -1.31
SF3B3-211ENST00000568291 NPCDR1Q9BY65 106 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 SLC25A31Q9H0C2 315 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 WFDC1Q9HC57 220 aa6.84□□□□□ -1.31
SF3B3-211ENST00000568291 A0A087X0K7 114 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 J3KRW8 73 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 IGLC2P0DOY2 106 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 MIFP14174 115 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 RPL12P30050 165 aaKnown RBP6.83□□□□□ -1.32
SF3B3-211ENST00000568291 S100A7P31151 101 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 RHOBP62745 196 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 PSG3Q16557 428 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 PXDC1Q5TGL8 231 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 LGALS9CQ6DKI2 356 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 Q6ZTC4 211 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 MIR17HGQ75NE6 70 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 BPIFA4PQ86YQ2 179 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 BLNKQ8WV28 456 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 C1QTNF4Q9BXJ3 329 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
SF3B3-211ENST00000568291 ZNF331Q9NQX6 463 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-211ENST00000568291 ZNF586Q9NXT0 402 aa6.83□□□□□ -1.32
SF3B3-211ENST00000568291 AGRNO00468 2067 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 ZNF705GA8MUZ8 300 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-211ENST00000568291 CRXO43186 299 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-211ENST00000568291 PTTG1O95997 202 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 HTN1P15515 57 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 TMEM41BQ5BJD5 291 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 ZNF705AQ6ZN79 300 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-211ENST00000568291 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 OR1L4Q8NGR5 311 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 SAT2Q96F10 170 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-211ENST00000568291 WDR61Q9GZS3 305 aaKnown RBP6.82□□□□□ -1.32
SF3B3-211ENST00000568291 MED28Q9H204 178 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 HSPB11Q9Y547 144 aa6.82□□□□□ -1.32
SF3B3-211ENST00000568291 DNAH6Q9C0G6 4158 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms