RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 GALR1P47211 349 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 ZNF345Q14585 488 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
TSC2-220ENST00000568238 STHQ8IWL8 128 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 RARRES2Q99969 163 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 ARPC5LQ9BPX5 153 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 NRN1Q9NPD7 142 aa9.44□□□□□ -0.9
TSC2-220ENST00000568238 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 K7EQG2 157 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 TAAR5O14804 337 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 PFDN1O60925 122 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 ATP6V0CP27449 155 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 SPATA31B1PQ5VZV4 182 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 OR11H2Q8NH07 326 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 GPR82Q96P67 336 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
TSC2-220ENST00000568238 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
TSC2-220ENST00000568238 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
TSC2-220ENST00000568238 DNAH10Q8IVF4 4471 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 A0A0D9SG52 128 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 BCL2L11O43521 198 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 LY6G6CO95867 125 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
TSC2-220ENST00000568238 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
TSC2-220ENST00000568238 ZFP69Q49AA0 526 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 FAM78BQ5VT40 261 aa9.42□□□□□ -0.9
TSC2-220ENST00000568238 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
TSC2-220ENST00000568238 RAB2AP61019 212 aa9.41□□□□□ -0.9
TSC2-220ENST00000568238 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
TSC2-220ENST00000568238 MIR17HGQ75NE6 70 aa9.41□□□□□ -0.9
TSC2-220ENST00000568238 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
TSC2-220ENST00000568238 GNPNAT1Q96EK6 184 aaPredicted RBP9.41□□□□□ -0.9
TSC2-220ENST00000568238 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
TSC2-220ENST00000568238 ZNF471Q9BX82 626 aaPredicted RBP9.41□□□□□ -0.9
TSC2-220ENST00000568238 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
TSC2-220ENST00000568238 H3BTX0 84 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
TSC2-220ENST00000568238 ACOT6Q3I5F7 207 aaPredicted RBP9.4□□□□□ -0.9
TSC2-220ENST00000568238 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 PSMG4Q5JS54 123 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 FAM122CQ6P4D5 195 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
TSC2-220ENST00000568238 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 C17orf77Q96MU5 243 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.9
TSC2-220ENST00000568238 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
TSC2-220ENST00000568238 FUT9Q9Y231 359 aa9.4□□□□□ -0.9
TSC2-220ENST00000568238 KNCNA6PVL3 124 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 SOCS3O14543 225 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 MRPS12O15235 138 aaKnown RBP9.39□□□□□ -0.91
TSC2-220ENST00000568238 SPP1P10451 314 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 M6PRP20645 277 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 MEOX2P50222 304 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 NANOS2P60321 138 aaKnown RBP9.39□□□□□ -0.91
TSC2-220ENST00000568238 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
TSC2-220ENST00000568238 RHOBP62745 196 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 LGALSLQ3ZCW2 172 aaPredicted RBP9.39□□□□□ -0.91
TSC2-220ENST00000568238 OR10G4Q8NGN3 311 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 C16orf92Q96LL3 132 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
TSC2-220ENST00000568238 A0A087X0K7 114 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 PYYP10082 97 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 C4BPBP20851 252 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 ID1P41134 155 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 PSMB3P49720 205 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 NKX2-5P52952 324 aaPredicted RBP9.38□□□□□ -0.91
TSC2-220ENST00000568238 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
TSC2-220ENST00000568238 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
TSC2-220ENST00000568238 A0A1W2PPV4 95 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 H3BQ15 152 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 ISLRO14498 428 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 DEFB4AO15263 64 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 OR7C2O60412 319 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 MBP02144 154 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 GIG44P09565 113 aaPredicted RBP9.37□□□□□ -0.91
TSC2-220ENST00000568238 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 SERF2P84101 59 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 SAMD13Q5VXD3 122 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 RNF182Q8N6D2 247 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 Q8NAQ8 132 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 TMEM14CQ9P0S9 112 aa9.37□□□□□ -0.91
TSC2-220ENST00000568238 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
TSC2-220ENST00000568238 SLC17A3O00476 420 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms