RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 NUPR2A6NF83 97 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 ZNF705EA8MWA4 302 aaPredicted RBP18.23■□□□□ 0.51
FANCA-228ENST00000567943 PET100P0DJ07 73 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 NANOS2P60321 138 aaKnown RBP18.23■□□□□ 0.51
FANCA-228ENST00000567943 THAP6Q8TBB0 222 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 LRRC20Q8TCA0 184 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 CHAC2Q8WUX2 184 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 CLUHP3Q96NS8 147 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 PXMP4Q9Y6I8 212 aa18.23■□□□□ 0.51
FANCA-228ENST00000567943 VPS13DQ5THJ4 4388 aa18.22■□□□□ 0.51
FANCA-228ENST00000567943 MPDU1O75352 247 aa18.22■□□□□ 0.51
FANCA-228ENST00000567943 RBMY1A1P0DJD3 496 aaKnown RBP18.22■□□□□ 0.51
FANCA-228ENST00000567943 RBMY1CP0DJD4 496 aa18.22■□□□□ 0.51
FANCA-228ENST00000567943 RBMY1FQ15415 496 aaKnown RBP18.22■□□□□ 0.51
FANCA-228ENST00000567943 BPIFA4PQ86YQ2 179 aa18.22■□□□□ 0.51
FANCA-228ENST00000567943 PFDN5Q99471 154 aa18.22■□□□□ 0.51
FANCA-228ENST00000567943 SNRPCP09234 159 aaKnown RBP18.21■□□□□ 0.51
FANCA-228ENST00000567943 PHLDA1Q8WV24 401 aaPredicted RBP18.21■□□□□ 0.51
FANCA-228ENST00000567943 NPCDR1Q9BY65 106 aa18.21■□□□□ 0.51
FANCA-228ENST00000567943 SLC35B3Q9H1N7 401 aa18.21■□□□□ 0.51
FANCA-228ENST00000567943 IGHV4-28A0A0C4DH34 117 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 MIFP14174 115 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 CXCL3P19876 107 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 HLA-DMBP28068 263 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 PSG9Q00887 426 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 ZNF709Q8N972 641 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 ZNF738Q8NE65 137 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 C11orf45Q8TAV5 145 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 MBD2Q9UBB5 411 aa18.2■□□□□ 0.5
FANCA-228ENST00000567943 TRAV5A0A0B4J249 113 aa18.19■□□□□ 0.5
FANCA-228ENST00000567943 LINC00476Q8WZB0 136 aa18.19■□□□□ 0.5
FANCA-228ENST00000567943 ZNF705DP0CH99 300 aaPredicted RBP18.18■□□□□ 0.5
FANCA-228ENST00000567943 ZNF705BP0CI00 300 aaPredicted RBP18.18■□□□□ 0.5
FANCA-228ENST00000567943 PSG3Q16557 428 aa18.18■□□□□ 0.5
FANCA-228ENST00000567943 LCN15Q6UWW0 184 aa18.18■□□□□ 0.5
FANCA-228ENST00000567943 MED28Q9H204 178 aa18.18■□□□□ 0.5
FANCA-228ENST00000567943 HSPB11Q9Y547 144 aa18.18■□□□□ 0.5
FANCA-228ENST00000567943 H3BTX0 84 aa18.17■□□□□ 0.5
FANCA-228ENST00000567943 CXCL2P19875 107 aa18.17■□□□□ 0.5
FANCA-228ENST00000567943 RPL12P30050 165 aaKnown RBP18.17■□□□□ 0.5
FANCA-228ENST00000567943 CNN1P51911 297 aaKnown RBP18.17■□□□□ 0.5
FANCA-228ENST00000567943 FCN2Q15485 313 aa18.17■□□□□ 0.5
FANCA-228ENST00000567943 WDR61Q9GZS3 305 aaKnown RBP18.17■□□□□ 0.5
FANCA-228ENST00000567943 MFFQ9GZY8 342 aa18.17■□□□□ 0.5
FANCA-228ENST00000567943 A8MTW9 85 aa18.16■□□□□ 0.5
FANCA-228ENST00000567943 DUSP14O95147 198 aaKnown RBP18.16■□□□□ 0.5
FANCA-228ENST00000567943 IGLC2P0DOY2 106 aa18.16■□□□□ 0.5
FANCA-228ENST00000567943 GCSAMLQ5JQS6 135 aa18.16■□□□□ 0.5
FANCA-228ENST00000567943 ATP5SQ99766 215 aa18.16■□□□□ 0.5
FANCA-228ENST00000567943 SLC50A1Q9BRV3 221 aa18.16■□□□□ 0.5
FANCA-228ENST00000567943 ZNF331Q9NQX6 463 aaPredicted RBP18.16■□□□□ 0.5
FANCA-228ENST00000567943 H3BQ15 152 aa18.15■□□□□ 0.5
FANCA-228ENST00000567943 PRB4P10163 310 aaPredicted RBP18.15■□□□□ 0.5
FANCA-228ENST00000567943 AMTNQ6UX39 209 aa18.15■□□□□ 0.5
FANCA-228ENST00000567943 OR11H7Q8NGC8 314 aa18.15■□□□□ 0.5
FANCA-228ENST00000567943 SMIM3Q9BZL3 60 aa18.15■□□□□ 0.5
FANCA-228ENST00000567943 HRH4Q9H3N8 390 aa18.15■□□□□ 0.5
FANCA-228ENST00000567943 IGHV3OR16-12A0A075B7B8 117 aa18.14■□□□□ 0.49
FANCA-228ENST00000567943 SLC17A3O00476 420 aa18.14■□□□□ 0.49
FANCA-228ENST00000567943 ZNF705AQ6ZN79 300 aaPredicted RBP18.14■□□□□ 0.49
FANCA-228ENST00000567943 KLK5Q9Y337 293 aaPredicted RBP18.14■□□□□ 0.49
FANCA-228ENST00000567943 HIST1H1AQ02539 215 aaPredicted RBP18.13■□□□□ 0.49
FANCA-228ENST00000567943 OR8A1Q8NGG7 326 aa18.13■□□□□ 0.49
FANCA-228ENST00000567943 RPUSD4Q96CM3 377 aaKnown RBP18.13■□□□□ 0.49
FANCA-228ENST00000567943 KCNIP2Q9NS61 270 aa18.13■□□□□ 0.49
FANCA-228ENST00000567943 DNAH6Q9C0G6 4158 aa18.12■□□□□ 0.49
FANCA-228ENST00000567943 ZNF705FA8MVS1 300 aaPredicted RBP18.12■□□□□ 0.49
FANCA-228ENST00000567943 RGS21Q2M5E4 152 aa18.12■□□□□ 0.49
FANCA-228ENST00000567943 SAT2Q96F10 170 aaPredicted RBP18.12■□□□□ 0.49
FANCA-228ENST00000567943 FRAS1Q86XX4 4008 aa18.12■□□□□ 0.49
FANCA-228ENST00000567943 C17orf112F2Z3M2 114 aa18.11■□□□□ 0.49
FANCA-228ENST00000567943 GUK1Q16774 197 aa18.11■□□□□ 0.49
FANCA-228ENST00000567943 NEU1Q99519 415 aa18.11■□□□□ 0.49
FANCA-228ENST00000567943 ZNF586Q9NXT0 402 aa18.11■□□□□ 0.49
FANCA-228ENST00000567943 GOLT1BQ9Y3E0 138 aa18.11■□□□□ 0.49
FANCA-228ENST00000567943 M0R2Z0 102 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 LY6G6CO95867 125 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 IFNA5P01569 189 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 RHOBP62745 196 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 SPINK13Q1W4C9 94 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 C1orf158Q8N1D5 194 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 TMEM14CQ9P0S9 112 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 CELA1Q9UNI1 258 aa18.1■□□□□ 0.49
FANCA-228ENST00000567943 AMBPP02760 352 aa18.09■□□□□ 0.49
FANCA-228ENST00000567943 SCGB1C1Q8TD33 95 aa18.09■□□□□ 0.49
FANCA-228ENST00000567943 IGF2BP2-AS1Q96M15 143 aa18.09■□□□□ 0.49
FANCA-228ENST00000567943 WFDC1Q9HC57 220 aa18.09■□□□□ 0.49
FANCA-228ENST00000567943 SMIM9A6NGZ8 99 aa18.08■□□□□ 0.48
FANCA-228ENST00000567943 PYYP10082 97 aa18.08■□□□□ 0.48
FANCA-228ENST00000567943 MIR17HGQ75NE6 70 aa18.08■□□□□ 0.48
FANCA-228ENST00000567943 SLC25A2Q9BXI2 301 aa18.08■□□□□ 0.48
FANCA-228ENST00000567943 PPP1R14DQ9NXH3 145 aa18.08■□□□□ 0.48
FANCA-228ENST00000567943 PRAC2D3DTV9 90 aa18.07■□□□□ 0.48
FANCA-228ENST00000567943 BOLA2-SMG1P6H3BVE0 249 aa18.07■□□□□ 0.48
FANCA-228ENST00000567943 HIST1H1EP10412 219 aaKnown RBP18.07■□□□□ 0.48
FANCA-228ENST00000567943 DNAH10Q8IVF4 4471 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 TRBV19A0A075B6N1 114 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 CRXO43186 299 aaPredicted RBP18.06■□□□□ 0.48
FANCA-228ENST00000567943 ZNF253O75346 499 aa18.06■□□□□ 0.48
FANCA-228ENST00000567943 FFAR4Q5NUL3 377 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms