RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 FOXI2Q6ZQN5 318 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 HSD17B11Q8NBQ5 300 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
COMMD4-220ENST00000567720 TIMM9Q9Y5J7 89 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 UBE2CO00762 179 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 CA1P00915 261 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-220ENST00000567720 GIG44P09565 113 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-220ENST00000567720 Q6ZWC4 215 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 ST6GAL2Q96JF0 529 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 CSTL1Q9H114 145 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 SH3BGRL3Q9H299 93 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-220ENST00000567720 RPRMQ9NS64 109 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 TMEM14CQ9P0S9 112 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
COMMD4-220ENST00000567720 hCG_2014768A0A024R1R8 64 aa12.6□□□□□ -0.39
COMMD4-220ENST00000567720 ATP6V0CP27449 155 aa12.6□□□□□ -0.39
COMMD4-220ENST00000567720 RAB2AP61019 212 aa12.6□□□□□ -0.39
COMMD4-220ENST00000567720 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
COMMD4-220ENST00000567720 ZNF586Q9NXT0 402 aa12.6□□□□□ -0.39
COMMD4-220ENST00000567720 A0A0J9YX75 114 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 EIF3GO75821 320 aaKnown RBP eCLIP12.59□□□□□ -0.39
COMMD4-220ENST00000567720 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-220ENST00000567720 SPP1P10451 314 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 ZNF345Q14585 488 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 OR2G3Q8NGZ4 309 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 SAT2Q96F10 170 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-220ENST00000567720 PSMG3Q9BT73 122 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-220ENST00000567720 MFFQ9GZY8 342 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 TP53TG1Q9Y2A0 90 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 CSMD3Q7Z407 3707 aa12.59□□□□□ -0.39
COMMD4-220ENST00000567720 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 M6PRP20645 277 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-220ENST00000567720 LRRC20Q8TCA0 184 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 RNF183Q96D59 192 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 ZNF503Q96F45 646 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 EDA2RQ9HAV5 297 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 CYTL1Q9NRR1 136 aa12.58□□□□□ -0.4
COMMD4-220ENST00000567720 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 HMSDA8MTL9 139 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 A8MTW9 85 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 SPRY2O43597 315 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 NDUFB4O95168 129 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 HIST1H1EP10412 219 aaKnown RBP12.57□□□□□ -0.4
COMMD4-220ENST00000567720 RHOBP62745 196 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 PSG3Q16557 428 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 GUK1Q16774 197 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 ACOT6Q3I5F7 207 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-220ENST00000567720 KCNRGQ8N5I3 272 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 WWC2-AS2Q96NR7 200 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 STARD9Q9P2P6 4700 aa12.57□□□□□ -0.4
COMMD4-220ENST00000567720 BORCS7-ASMTA0A0B4J1R7 106 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 OR7C2O60412 319 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 ZNF253O75346 499 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 OR10J4P0C629 311 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-220ENST00000567720 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-220ENST00000567720 EBLN2Q6P2I7 272 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 OR4B1Q8NGF8 309 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
COMMD4-220ENST00000567720 TAAR5O14804 337 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
COMMD4-220ENST00000567720 PDE6HQ13956 83 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 KHDC3LQ587J8 217 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 AMTNQ6UX39 209 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 RPUSD4Q96CM3 377 aaKnown RBP12.55□□□□□ -0.4
COMMD4-220ENST00000567720 PHYHIPLQ96FC7 376 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 CLUHP3Q96NS8 147 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 SLC35B3Q9H1N7 401 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 OR51M1Q9H341 326 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
COMMD4-220ENST00000567720 A0A1B0GVG6 124 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 ZNF705FA8MVS1 300 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-220ENST00000567720 PRAC2D3DTV9 90 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 FXYD7P58549 80 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 UBE2L3P68036 154 aaKnown RBP12.54□□□□□ -0.4
COMMD4-220ENST00000567720 TMEM41BQ5BJD5 291 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 CSNK1G2-AS1Q8NCQ2 148 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 OR8A1Q8NGG7 326 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 OR10G4Q8NGN3 311 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 OR10G9Q8NGN4 311 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 OR10G7Q8NGN6 311 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 GNPNAT1Q96EK6 184 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-220ENST00000567720 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
COMMD4-220ENST00000567720 M0R3E3 92 aa12.53□□□□□ -0.4
COMMD4-220ENST00000567720 JTBO76095 146 aa12.53□□□□□ -0.4
COMMD4-220ENST00000567720 CDC34P49427 236 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-220ENST00000567720 TAS2R45P59539 299 aa12.53□□□□□ -0.4
COMMD4-220ENST00000567720 SERF2P84101 59 aa12.53□□□□□ -0.4
COMMD4-220ENST00000567720 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-220ENST00000567720 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms