RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 LINC00336Q6ZUF6 198 aa14.34□□□□□ -0.11
CLN6-207ENST00000566347 OR8A1Q8NGG7 326 aa14.34□□□□□ -0.11
CLN6-207ENST00000566347 PPP1R14DQ9NXH3 145 aa14.34□□□□□ -0.11
CLN6-207ENST00000566347 TRAV6A0A075B6T7 132 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 FAM25EA8MYX2 175 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 HTN3P15516 51 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 RHOBP62745 196 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 LCN15Q6UWW0 184 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 LINC00305Q7Z4B0 112 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 ZNF431Q8TF32 576 aaPredicted RBP14.33□□□□□ -0.12
CLN6-207ENST00000566347 NUDT15Q9NV35 164 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 PLA2G2EQ9NZK7 142 aa14.33□□□□□ -0.12
CLN6-207ENST00000566347 LYRM9A8MSI8 78 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 MRPS12O15235 138 aaKnown RBP14.32□□□□□ -0.12
CLN6-207ENST00000566347 COX7A2P2O60397 106 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 TSPOP30536 169 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 BCAP31P51572 246 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 RAB31Q13636 194 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 BPIFA4PQ86YQ2 179 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 BAP18Q8IXM2 172 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 TMEM256Q8N2U0 113 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 MGST2Q99735 147 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 SLC50A1Q9BRV3 221 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 CCDC32Q9BV29 185 aa14.32□□□□□ -0.12
CLN6-207ENST00000566347 LSM5Q9Y4Y9 91 aaKnown RBP14.32□□□□□ -0.12
CLN6-207ENST00000566347 C5orf51A6NDU8 294 aa14.31□□□□□ -0.12
CLN6-207ENST00000566347 ZNF705GA8MUZ8 300 aaPredicted RBP14.31□□□□□ -0.12
CLN6-207ENST00000566347 UBE2DNLQ8IWF7 75 aa14.31□□□□□ -0.12
CLN6-207ENST00000566347 RPUSD4Q96CM3 377 aaKnown RBP14.31□□□□□ -0.12
CLN6-207ENST00000566347 TRAV12-2A0A075B6T6 113 aa14.3□□□□□ -0.12
CLN6-207ENST00000566347 PVALBP20472 110 aaPredicted RBP14.3□□□□□ -0.12
CLN6-207ENST00000566347 CAV2P51636 162 aa14.3□□□□□ -0.12
CLN6-207ENST00000566347 C10orf113Q5VZT2 155 aa14.3□□□□□ -0.12
CLN6-207ENST00000566347 C12orf45Q8N5I9 185 aaPredicted RBP14.3□□□□□ -0.12
CLN6-207ENST00000566347 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
CLN6-207ENST00000566347 SEC22CQ9BRL7 303 aa14.3□□□□□ -0.12
CLN6-207ENST00000566347 ZNF331Q9NQX6 463 aaPredicted RBP14.3□□□□□ -0.12
CLN6-207ENST00000566347 CAMLGP49069 296 aa14.29□□□□□ -0.12
CLN6-207ENST00000566347 Q6ZRG5 221 aa14.29□□□□□ -0.12
CLN6-207ENST00000566347 TMEM37Q8WXS4 190 aa14.29□□□□□ -0.12
CLN6-207ENST00000566347 LINC01587Q99440 93 aa14.29□□□□□ -0.12
CLN6-207ENST00000566347 CST7O76096 145 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 PRM2P04554 102 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 H2AFB2P0C5Z0 115 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 CDKN1BP46527 198 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 TAS2R60P59551 318 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 LGALS9BQ3B8N2 356 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 RNF212Q495C1 297 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 TMEM88Q6PEY1 159 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 NRARPQ7Z6K4 114 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 DNAJC4Q9NNZ3 241 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 UQCC1Q9NVA1 299 aa14.28□□□□□ -0.12
CLN6-207ENST00000566347 FAM240BA0A1B0GVZ2 78 aa14.27□□□□□ -0.13
CLN6-207ENST00000566347 OPCMLQ14982 345 aa14.27□□□□□ -0.13
CLN6-207ENST00000566347 C15orf53Q8NAA6 179 aa14.27□□□□□ -0.13
CLN6-207ENST00000566347 OR1L4Q8NGR5 311 aa14.27□□□□□ -0.13
CLN6-207ENST00000566347 C11orf1Q9H5F2 150 aa14.27□□□□□ -0.13
CLN6-207ENST00000566347 PXMP4Q9Y6I8 212 aa14.27□□□□□ -0.13
CLN6-207ENST00000566347 FAM24AA6NFZ4 105 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 M0R2N4 97 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 SULT1A1P50225 295 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 S100A10P60903 97 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 LINC00299Q6ZSB3 139 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 C16orf74Q96GX8 76 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 PFDN5Q99471 154 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
CLN6-207ENST00000566347 WDR83OSQ9Y284 106 aa14.26□□□□□ -0.13
CLN6-207ENST00000566347 PLAC8L1A1L4L8 177 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 IGLC2P0DOY2 106 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 DEFB130BP0DP73 79 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 DEFB130AP0DP74 79 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 AZU1P20160 251 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 S100A11P31949 105 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 HBG1P69891 147 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 HBG2P69892 147 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 GUK1Q16774 197 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 VWC2Q2TAL6 325 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 MORN5Q5VZ52 161 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 MIC13Q5XKP0 118 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 MZT2BQ6NZ67 158 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 STX12Q86Y82 276 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 OR10J6PQ8NGY7 276 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 C20orf144Q9BQM9 153 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 DNAH2Q9P225 4427 aa14.25□□□□□ -0.13
CLN6-207ENST00000566347 SLC17A3O00476 420 aa14.24□□□□□ -0.13
CLN6-207ENST00000566347 SNRPCP09234 159 aaKnown RBP14.24□□□□□ -0.13
CLN6-207ENST00000566347 ZNF493Q6ZR52 646 aa14.24□□□□□ -0.13
CLN6-207ENST00000566347 H7BYZ3 331 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 HTN1P15515 57 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 RPL29P47914 159 aaKnown RBP14.23□□□□□ -0.13
CLN6-207ENST00000566347 BAXQ07812 192 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 IL15RAQ13261 267 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 RAB32Q13637 225 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 S100ZQ8WXG8 99 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 SAT2Q96F10 170 aaPredicted RBP14.23□□□□□ -0.13
CLN6-207ENST00000566347 TIMM8BQ9Y5J9 83 aaPredicted RBP14.23□□□□□ -0.13
CLN6-207ENST00000566347 FAT2Q9NYQ8 4349 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 DNAH17Q9UFH2 4485 aa14.23□□□□□ -0.13
CLN6-207ENST00000566347 IGLV2-18A0A075B6J9 118 aa14.22□□□□□ -0.13
CLN6-207ENST00000566347 UBE2L5PA0A1B0GUS4 154 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms