RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MIR17HGQ75NE6 70 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 ZNF738Q8NE65 137 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
RAB40C-208ENST00000564703 OR51M1Q9H341 326 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 AGRNO00468 2067 aa11.77□□□□□ -0.52
RAB40C-208ENST00000564703 H3BMM0 161 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 ATP6V0CP27449 155 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 PSG3Q16557 428 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 TMEM41BQ5BJD5 291 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 IGFL4Q6B9Z1 124 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 TRPT1Q86TN4 253 aaKnown RBP11.77□□□□□ -0.53
RAB40C-208ENST00000564703 OR4B1Q8NGF8 309 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 OR10G4Q8NGN3 311 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 ST6GAL2Q96JF0 529 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 ARPC5LQ9BPX5 153 aa11.77□□□□□ -0.53
RAB40C-208ENST00000564703 SAV1Q9H4B6 383 aaPredicted RBP11.77□□□□□ -0.53
RAB40C-208ENST00000564703 H3BQ15 152 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 H3BTX0 84 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 SPRY2O43597 315 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 OR7C2O60412 319 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
RAB40C-208ENST00000564703 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 HLA-DRB4P13762 266 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 PSG9Q00887 426 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 ZNF345Q14585 488 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 KCNRGQ8N5I3 272 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 OR11H4Q8NGC9 324 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 BLNKQ8WV28 456 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 C20orf173Q96LM9 149 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 PAXXQ9BUH6 204 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 SLC25A2Q9BXI2 301 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 ZNF331Q9NQX6 463 aaPredicted RBP11.76□□□□□ -0.53
RAB40C-208ENST00000564703 RFNGQ9Y644 331 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 HLA-DRB4X5D2U9 266 aa11.76□□□□□ -0.53
RAB40C-208ENST00000564703 TRAV8-2A0A0B4J237 113 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 KANTRA0A1W2PQU2 76 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
RAB40C-208ENST00000564703 IGKV3-20P01619 116 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 NBEAP1P0C6P0 100 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 PYYP10082 97 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 FAM122CQ6P4D5 195 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 TCTE3Q8IZS6 198 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 OR2G3Q8NGZ4 309 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 RNF141Q8WVD5 230 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 C1QTNF4Q9BXJ3 329 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 TP53TG1Q9Y2A0 90 aa11.75□□□□□ -0.53
RAB40C-208ENST00000564703 TRBV19A0A075B6N1 114 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 A0A0J9YX75 114 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 PFDN1O60925 122 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 ZNF253O75346 499 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 EIF5AP63241 154 aaKnown RBP11.74□□□□□ -0.53
RAB40C-208ENST00000564703 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
RAB40C-208ENST00000564703 SAT2Q96F10 170 aaPredicted RBP11.74□□□□□ -0.53
RAB40C-208ENST00000564703 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 AAMDCQ9H7C9 122 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 RETNQ9HD89 108 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
RAB40C-208ENST00000564703 F6UB75 175 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 OR10J4P0C629 311 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 DEFB1P60022 68 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 RAB2AP61019 212 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 PDE6HQ13956 83 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 RNF183Q96D59 192 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 CLUHP3Q96NS8 147 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 ACTR3CQ9C0K3 210 aaPredicted RBP11.73□□□□□ -0.53
RAB40C-208ENST00000564703 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
RAB40C-208ENST00000564703 HLA-DMBP28068 263 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
RAB40C-208ENST00000564703 AKR1C8PQ5T2L2 129 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 HYLS1Q96M11 299 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
RAB40C-208ENST00000564703 CYTL1Q9NRR1 136 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
RAB40C-208ENST00000564703 SLC17A3O00476 420 aa11.71□□□□□ -0.53
RAB40C-208ENST00000564703 C1QBP02746 253 aa11.71□□□□□ -0.53
RAB40C-208ENST00000564703 UBE2L3P68036 154 aaKnown RBP11.71□□□□□ -0.53
RAB40C-208ENST00000564703 HIST1H1AQ02539 215 aaPredicted RBP11.71□□□□□ -0.53
RAB40C-208ENST00000564703 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.53
RAB40C-208ENST00000564703 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
RAB40C-208ENST00000564703 RARRES2Q99969 163 aa11.71□□□□□ -0.53
RAB40C-208ENST00000564703 XCL2Q9UBD3 114 aa11.71□□□□□ -0.53
RAB40C-208ENST00000564703 ZNF705FA8MVS1 300 aaPredicted RBP11.7□□□□□ -0.54
RAB40C-208ENST00000564703 BCL2L11O43521 198 aa11.7□□□□□ -0.54
RAB40C-208ENST00000564703 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
RAB40C-208ENST00000564703 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
RAB40C-208ENST00000564703 C4BPBP20851 252 aa11.7□□□□□ -0.54
RAB40C-208ENST00000564703 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms