RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TRAV8-2A0A0B4J237 113 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 F6UB75 175 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 SNRPCP09234 159 aaKnown RBP7.25□□□□□ -1.25
CDH1-206ENST00000564676 FXYD7P58549 80 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 MORN5Q5VZ52 161 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 RNF182Q8N6D2 247 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 ZNF738Q8NE65 137 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 OR11H7Q8NGC8 314 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 SCGB1C1Q8TD33 95 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 ATP5SQ99766 215 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 C1QTNF4Q9BXJ3 329 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 SMIM3Q9BZL3 60 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 WDR61Q9GZS3 305 aaKnown RBP7.25□□□□□ -1.25
CDH1-206ENST00000564676 KCNIP2Q9NS61 270 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 XCL2Q9UBD3 114 aa7.25□□□□□ -1.25
CDH1-206ENST00000564676 TRAV5A0A0B4J249 113 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 A0A0J9YX75 114 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 C17orf112F2Z3M2 114 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 MRPS12O15235 138 aaKnown RBP7.24□□□□□ -1.25
CDH1-206ENST00000564676 IFNA5P01569 189 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 PSG9Q00887 426 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 FAM78BQ5VT40 261 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 LCN15Q6UWW0 184 aa7.24□□□□□ -1.25
CDH1-206ENST00000564676 CXorf65A6NEN9 183 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 H3BTX0 84 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 DEFB4AO15263 64 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 DUSP14O95147 198 aaKnown RBP7.23□□□□□ -1.25
CDH1-206ENST00000564676 CXCL2P19875 107 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 PMS2P11Q13670 270 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 OXA1LQ15070 435 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 PSG3Q16557 428 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 CLUHP3Q96NS8 147 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 SLC50A1Q9BRV3 221 aa7.23□□□□□ -1.25
CDH1-206ENST00000564676 ZNF705EA8MWA4 302 aaPredicted RBP7.22□□□□□ -1.25
CDH1-206ENST00000564676 GIPP09681 153 aaPredicted RBP7.22□□□□□ -1.25
CDH1-206ENST00000564676 ZNF705DP0CH99 300 aaPredicted RBP7.22□□□□□ -1.25
CDH1-206ENST00000564676 ZNF705BP0CI00 300 aaPredicted RBP7.22□□□□□ -1.25
CDH1-206ENST00000564676 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 MIFP14174 115 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 CNN1P51911 297 aaKnown RBP7.22□□□□□ -1.25
CDH1-206ENST00000564676 GCSAMLQ5JQS6 135 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 CSNK1G2-AS1Q8NCQ2 148 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 MFFQ9GZY8 342 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 SLC35B3Q9H1N7 401 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 HRH4Q9H3N8 390 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 ZNF331Q9NQX6 463 aaPredicted RBP7.22□□□□□ -1.25
CDH1-206ENST00000564676 PPP1R14DQ9NXH3 145 aa7.22□□□□□ -1.25
CDH1-206ENST00000564676 STARD9Q9P2P6 4700 aa7.21□□□□□ -1.25
CDH1-206ENST00000564676 IGHV3OR16-12A0A075B7B8 117 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 H3BQ15 152 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 RHOBP62745 196 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 HIST1H1AQ02539 215 aaPredicted RBP7.21□□□□□ -1.26
CDH1-206ENST00000564676 GUK1Q16774 197 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 FFAR4Q5NUL3 377 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 Q8NAQ8 132 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 OR8A1Q8NGG7 326 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 C11orf45Q8TAV5 145 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 ASB13Q8WXK3 278 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 RPUSD4Q96CM3 377 aaKnown RBP7.21□□□□□ -1.26
CDH1-206ENST00000564676 C11orf68Q9H3H3 251 aaKnown RBP7.21□□□□□ -1.26
CDH1-206ENST00000564676 WFDC1Q9HC57 220 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 ZNF586Q9NXT0 402 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 GOLT1BQ9Y3E0 138 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 X6R8D5 127 aa7.21□□□□□ -1.26
CDH1-206ENST00000564676 ZNF705FA8MVS1 300 aaPredicted RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 SLC17A3O00476 420 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 RBMY1A1P0DJD3 496 aaKnown RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 RBMY1CP0DJD4 496 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 PYYP10082 97 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 PRB4P10163 310 aaPredicted RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 HIST1H1EP10412 219 aaKnown RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 RBMY1FQ15415 496 aaKnown RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 Q5BKY6 102 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 BLNKQ8WV28 456 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 SAT2Q96F10 170 aaPredicted RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 SLC25A2Q9BXI2 301 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 MRPL32Q9BYC8 188 aaKnown RBP7.2□□□□□ -1.26
CDH1-206ENST00000564676 TIMM9Q9Y5J7 89 aa7.2□□□□□ -1.26
CDH1-206ENST00000564676 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
CDH1-206ENST00000564676 TRBV19A0A075B6N1 114 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 FXYD6-FXYD2A0A087WZ82 144 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 A8MTW9 85 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 ZNF253O75346 499 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 AMBPP02760 352 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
CDH1-206ENST00000564676 ZNF266Q14584 549 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 SPINK13Q1W4C9 94 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 XP32Q5T750 250 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 AMTNQ6UX39 209 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 ZNF705AQ6ZN79 300 aaPredicted RBP7.19□□□□□ -1.26
CDH1-206ENST00000564676 INO80EQ8NBZ0 244 aaPredicted RBP7.19□□□□□ -1.26
CDH1-206ENST00000564676 OR2T35Q8NGX2 323 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 OR10J6PQ8NGY7 276 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 AQP10Q96PS8 301 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 TMEM208Q9BTX3 173 aa7.19□□□□□ -1.26
CDH1-206ENST00000564676 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms