RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SLC35B3Q9H1N7 401 aa13.28□□□□□ -0.28
SYNGR3-204ENST00000564642 OR5AC2Q9NZP5 309 aa13.28□□□□□ -0.28
SYNGR3-204ENST00000564642 IGHV3OR16-12A0A075B7B8 117 aa13.27□□□□□ -0.29
SYNGR3-204ENST00000564642 MPDU1O75352 247 aa13.27□□□□□ -0.29
SYNGR3-204ENST00000564642 H2BFSP57053 126 aa13.27□□□□□ -0.29
SYNGR3-204ENST00000564642 B2MP61769 119 aa13.27□□□□□ -0.29
SYNGR3-204ENST00000564642 ZNF709Q8N972 641 aa13.27□□□□□ -0.29
SYNGR3-204ENST00000564642 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
SYNGR3-204ENST00000564642 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 CXCL2P19875 107 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 CXCL3P19876 107 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 OPCMLQ14982 345 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 OR5C1Q8NGR4 320 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 CHAC2Q8WUX2 184 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 PPP1R1CQ8WVI7 109 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 HRH4Q9H3N8 390 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 PXMP4Q9Y6I8 212 aa13.26□□□□□ -0.29
SYNGR3-204ENST00000564642 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 H0YIZ8 118 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 ZNF705DP0CH99 300 aaPredicted RBP13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 ZNF705BP0CI00 300 aaPredicted RBP13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 PET100P0DJ07 73 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 PSG3Q16557 428 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 MORN5Q5VZ52 161 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 LCN15Q6UWW0 184 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 ZNF705AQ6ZN79 300 aaPredicted RBP13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 NEU1Q99519 415 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 GOLT1BQ9Y3E0 138 aa13.25□□□□□ -0.29
SYNGR3-204ENST00000564642 A8MTW9 85 aa13.24□□□□□ -0.29
SYNGR3-204ENST00000564642 SNRPCP09234 159 aaKnown RBP13.24□□□□□ -0.29
SYNGR3-204ENST00000564642 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
SYNGR3-204ENST00000564642 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
SYNGR3-204ENST00000564642 NPCDR1Q9BY65 106 aa13.24□□□□□ -0.29
SYNGR3-204ENST00000564642 SACSQ9NZJ4 4579 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 TRAV5A0A0B4J249 113 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 ZNF705FA8MVS1 300 aaPredicted RBP13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 C11orf94C9JXX5 98 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 AMBPP02760 352 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 CLINT1Q14677 625 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 AMTNQ6UX39 209 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 ZNF331Q9NQX6 463 aaPredicted RBP13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
SYNGR3-204ENST00000564642 MPC2O95563 127 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 LY6G6CO95867 125 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 PTTG1O95997 202 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 RHOBP62745 196 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 GUK1Q16774 197 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 OR11H7Q8NGC8 314 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 OR8A1Q8NGG7 326 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 C2CD4CQ8TF44 421 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 TMEM208Q9BTX3 173 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 RNF126Q9BV68 326 aa13.22□□□□□ -0.29
SYNGR3-204ENST00000564642 TMEM189A5PLL7 270 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 H3BTX0 84 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 IGLC2P0DOY2 106 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 SPINK13Q1W4C9 94 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 C1orf158Q8N1D5 194 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 IGF2BP2-AS1Q96M15 143 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 RFNGQ9Y644 331 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 ALG5Q9Y673 324 aa13.21□□□□□ -0.29
SYNGR3-204ENST00000564642 M0R2Z0 102 aa13.2□□□□□ -0.3
SYNGR3-204ENST00000564642 HBE1P02100 147 aa13.2□□□□□ -0.3
SYNGR3-204ENST00000564642 EMP1P54849 157 aa13.2□□□□□ -0.3
SYNGR3-204ENST00000564642 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
SYNGR3-204ENST00000564642 CELA1Q9UNI1 258 aa13.2□□□□□ -0.3
SYNGR3-204ENST00000564642 TRAV10A0A0B4J240 114 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 H3BQ15 152 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 SLC17A3O00476 420 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 RRN3P1Q2M238 152 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 Q6ZTC4 211 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 SAT2Q96F10 170 aaPredicted RBP13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 WDR61Q9GZS3 305 aaKnown RBP13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 MBD2Q9UBB5 411 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
SYNGR3-204ENST00000564642 LYSTQ99698 3801 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 IGLL5B9A064 214 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 INSP01308 110 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 RPL12P30050 165 aaKnown RBP13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 ATP5SQ99766 215 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
SYNGR3-204ENST00000564642 LOC102723971A0A1B0GUV8 181 aa13.17□□□□□ -0.3
SYNGR3-204ENST00000564642 CRXO43186 299 aaPredicted RBP13.17□□□□□ -0.3
SYNGR3-204ENST00000564642 TCTAP57738 103 aa13.17□□□□□ -0.3
SYNGR3-204ENST00000564642 GCSAMLQ5JQS6 135 aa13.17□□□□□ -0.3
SYNGR3-204ENST00000564642 SCGB1C1Q8TD33 95 aa13.17□□□□□ -0.3
SYNGR3-204ENST00000564642 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
SYNGR3-204ENST00000564642 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
SYNGR3-204ENST00000564642 ZNF253O75346 499 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms