RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 RNF222A6NCQ9 220 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 H3BQ15 152 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 ZNF253O75346 499 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 GUK1Q16774 197 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 SCGB1C1Q8TD33 95 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 FAM167A-AS1Q96KT0 104 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 SLC50A1Q9BRV3 221 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 TNFSF18Q9UNG2 199 aa12.61□□□□□ -0.39
USB1-209ENST00000564387 F6UB75 175 aa12.6□□□□□ -0.39
USB1-209ENST00000564387 NUTF2P61970 127 aaKnown RBP12.6□□□□□ -0.39
USB1-209ENST00000564387 PSG3Q16557 428 aa12.6□□□□□ -0.39
USB1-209ENST00000564387 FAM78BQ5VT40 261 aa12.6□□□□□ -0.39
USB1-209ENST00000564387 RNF182Q8N6D2 247 aa12.6□□□□□ -0.39
USB1-209ENST00000564387 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
USB1-209ENST00000564387 TIMM9Q9Y5J7 89 aa12.6□□□□□ -0.39
USB1-209ENST00000564387 ZNF705EA8MWA4 302 aaPredicted RBP12.59□□□□□ -0.39
USB1-209ENST00000564387 EBLN2Q6P2I7 272 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 RARRES2Q99969 163 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 SLC25A2Q9BXI2 301 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 C1QTNF4Q9BXJ3 329 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
USB1-209ENST00000564387 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
USB1-209ENST00000564387 SLC17A3O00476 420 aa12.58□□□□□ -0.4
USB1-209ENST00000564387 HIST1H1EP10412 219 aaKnown RBP12.58□□□□□ -0.4
USB1-209ENST00000564387 HLA-DMBP28068 263 aa12.58□□□□□ -0.4
USB1-209ENST00000564387 ZNF266Q14584 549 aa12.58□□□□□ -0.4
USB1-209ENST00000564387 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
USB1-209ENST00000564387 FUT9Q9Y231 359 aa12.58□□□□□ -0.4
USB1-209ENST00000564387 DUSP14O95147 198 aaKnown RBP12.57□□□□□ -0.4
USB1-209ENST00000564387 PSG9Q00887 426 aa12.57□□□□□ -0.4
USB1-209ENST00000564387 PDE6HQ13956 83 aa12.57□□□□□ -0.4
USB1-209ENST00000564387 FFAR4Q5NUL3 377 aa12.57□□□□□ -0.4
USB1-209ENST00000564387 MIR17HGQ75NE6 70 aa12.57□□□□□ -0.4
USB1-209ENST00000564387 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
USB1-209ENST00000564387 RFNGQ9Y644 331 aa12.57□□□□□ -0.4
USB1-209ENST00000564387 CSMD3Q7Z407 3707 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 FXYD6-FXYD2A0A087WZ82 144 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 A0A0J9YWU9 116 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 NDUFB4O95168 129 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
USB1-209ENST00000564387 CNN1P51911 297 aaKnown RBP12.56□□□□□ -0.4
USB1-209ENST00000564387 ZNF738Q8NE65 137 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 OR4B1Q8NGF8 309 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 OR8A1Q8NGG7 326 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 OR2G3Q8NGZ4 309 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 PSMG3Q9BT73 122 aaPredicted RBP12.56□□□□□ -0.4
USB1-209ENST00000564387 C11orf68Q9H3H3 251 aaKnown RBP12.56□□□□□ -0.4
USB1-209ENST00000564387 X6R8D5 127 aa12.56□□□□□ -0.4
USB1-209ENST00000564387 H3BTX0 84 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 PYYP10082 97 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 CASC10Q5T4H9 136 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
USB1-209ENST00000564387 Q8NAQ8 132 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 RPUSD4Q96CM3 377 aaKnown RBP12.55□□□□□ -0.4
USB1-209ENST00000564387 ZNF503Q96F45 646 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 SLC35B3Q9H1N7 401 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
USB1-209ENST00000564387 IGKV3-20P01619 116 aa12.54□□□□□ -0.4
USB1-209ENST00000564387 M6PRP20645 277 aa12.54□□□□□ -0.4
USB1-209ENST00000564387 RHOBP62745 196 aa12.54□□□□□ -0.4
USB1-209ENST00000564387 Q6ZNX1 250 aa12.54□□□□□ -0.4
USB1-209ENST00000564387 FXYD5Q96DB9 178 aa12.54□□□□□ -0.4
USB1-209ENST00000564387 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
USB1-209ENST00000564387 OR51M1Q9H341 326 aa12.54□□□□□ -0.4
USB1-209ENST00000564387 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
USB1-209ENST00000564387 NBEAP1P0C6P0 100 aa12.53□□□□□ -0.4
USB1-209ENST00000564387 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
USB1-209ENST00000564387 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
USB1-209ENST00000564387 MIFP14174 115 aa12.53□□□□□ -0.4
USB1-209ENST00000564387 ATP6V0CP27449 155 aa12.53□□□□□ -0.4
USB1-209ENST00000564387 SERF2P84101 59 aa12.53□□□□□ -0.4
USB1-209ENST00000564387 NEU1Q99519 415 aa12.53□□□□□ -0.4
USB1-209ENST00000564387 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 AMBPP02760 352 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 ACOT6Q3I5F7 207 aaPredicted RBP12.52□□□□□ -0.41
USB1-209ENST00000564387 HSD17B11Q8NBQ5 300 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 RNF141Q8WVD5 230 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 PAXXQ9BUH6 204 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 PRELID1Q9Y255 219 aa12.52□□□□□ -0.41
USB1-209ENST00000564387 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 SMLR1H3BR10 107 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 TAAR5O14804 337 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 CRXO43186 299 aaPredicted RBP12.51□□□□□ -0.41
USB1-209ENST00000564387 RBMY1A1P0DJD3 496 aaKnown RBP12.51□□□□□ -0.41
USB1-209ENST00000564387 RBMY1CP0DJD4 496 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 ZNF345Q14585 488 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 RBMY1FQ15415 496 aaKnown RBP12.51□□□□□ -0.41
USB1-209ENST00000564387 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
USB1-209ENST00000564387 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 IGF2BP2-AS1Q96M15 143 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
USB1-209ENST00000564387 STARD9Q9P2P6 4700 aa12.5□□□□□ -0.41
USB1-209ENST00000564387 KMT2CQ8NEZ4 4911 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms