RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ZNF705DP0CH99 300 aaPredicted RBP22.2■■□□□ 1.14
CMTM4-204ENST00000563952 ZNF705BP0CI00 300 aaPredicted RBP22.2■■□□□ 1.14
CMTM4-204ENST00000563952 HLA-DMBP28068 263 aa22.2■■□□□ 1.14
CMTM4-204ENST00000563952 H0YIZ8 118 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 CXCL3P19876 107 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 CNN1P51911 297 aaKnown RBP22.19■■□□□ 1.14
CMTM4-204ENST00000563952 B2MP61769 119 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 OPCMLQ14982 345 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 ZNF705AQ6ZN79 300 aaPredicted RBP22.19■■□□□ 1.14
CMTM4-204ENST00000563952 BPIFA4PQ86YQ2 179 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 OR1L4Q8NGR5 311 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 HRH4Q9H3N8 390 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 SLC39A9Q9NUM3 307 aa22.19■■□□□ 1.14
CMTM4-204ENST00000563952 DUSP14O95147 198 aaKnown RBP22.18■■□□□ 1.14
CMTM4-204ENST00000563952 RPL29P47914 159 aaKnown RBP22.18■■□□□ 1.14
CMTM4-204ENST00000563952 OR5C1Q8NGR4 320 aa22.18■■□□□ 1.14
CMTM4-204ENST00000563952 PPP1R1CQ8WVI7 109 aa22.17■■□□□ 1.14
CMTM4-204ENST00000563952 PFDN5Q99471 154 aa22.17■■□□□ 1.14
CMTM4-204ENST00000563952 PXMP4Q9Y6I8 212 aa22.17■■□□□ 1.14
CMTM4-204ENST00000563952 A8MTW9 85 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 ZNF705FA8MVS1 300 aaPredicted RBP22.16■■□□□ 1.14
CMTM4-204ENST00000563952 H3BTX0 84 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 PRB4P10163 310 aaPredicted RBP22.16■■□□□ 1.14
CMTM4-204ENST00000563952 PSG3Q16557 428 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 LCN15Q6UWW0 184 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 AMTNQ6UX39 209 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 THAP6Q8TBB0 222 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 LINC00476Q8WZB0 136 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 GOLT1BQ9Y3E0 138 aa22.16■■□□□ 1.14
CMTM4-204ENST00000563952 TRAV5A0A0B4J249 113 aa22.15■■□□□ 1.14
CMTM4-204ENST00000563952 CXCL2P19875 107 aa22.15■■□□□ 1.14
CMTM4-204ENST00000563952 CLINT1Q14677 625 aa22.15■■□□□ 1.14
CMTM4-204ENST00000563952 CHAC2Q8WUX2 184 aa22.15■■□□□ 1.14
CMTM4-204ENST00000563952 NEU1Q99519 415 aa22.15■■□□□ 1.14
CMTM4-204ENST00000563952 CELA1Q9UNI1 258 aa22.15■■□□□ 1.14
CMTM4-204ENST00000563952 PLECQ15149 4684 aaKnown RBP22.15■■□□□ 1.14
CMTM4-204ENST00000563952 MPDU1O75352 247 aa22.14■■□□□ 1.13
CMTM4-204ENST00000563952 LY6G6CO95867 125 aa22.14■■□□□ 1.13
CMTM4-204ENST00000563952 HIST1H1AQ02539 215 aaPredicted RBP22.14■■□□□ 1.13
CMTM4-204ENST00000563952 OR11H7Q8NGC8 314 aa22.14■■□□□ 1.13
CMTM4-204ENST00000563952 NPCDR1Q9BY65 106 aa22.14■■□□□ 1.13
CMTM4-204ENST00000563952 SLC50A1Q9BRV3 221 aa22.13■■□□□ 1.13
CMTM4-204ENST00000563952 ZNF331Q9NQX6 463 aaPredicted RBP22.13■■□□□ 1.13
CMTM4-204ENST00000563952 ALMS1Q8TCU4 4167 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 SMIM9A6NGZ8 99 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 M0R2Z0 102 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 EMP1P54849 157 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 SPINK13Q1W4C9 94 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 C1orf158Q8N1D5 194 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 OR8A1Q8NGG7 326 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 C2CD4CQ8TF44 421 aa22.12■■□□□ 1.13
CMTM4-204ENST00000563952 RPUSD4Q96CM3 377 aaKnown RBP22.12■■□□□ 1.13
CMTM4-204ENST00000563952 SLC17A3O00476 420 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 MPC2O95563 127 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 IGLC2P0DOY2 106 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 RHOBP62745 196 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 Q6ZTC4 211 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 ZNF767PQ75MW2 155 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 IGF2BP2-AS1Q96M15 143 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 RNF126Q9BV68 326 aa22.11■■□□□ 1.13
CMTM4-204ENST00000563952 C11orf94C9JXX5 98 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 H3BQ15 152 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 PET100P0DJ07 73 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 TMEM208Q9BTX3 173 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 PPP1R14DQ9NXH3 145 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 RFNGQ9Y644 331 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 ALG5Q9Y673 324 aa22.1■■□□□ 1.13
CMTM4-204ENST00000563952 AMBPP02760 352 aa22.09■■□□□ 1.13
CMTM4-204ENST00000563952 PTTG1O95997 202 aa22.08■■□□□ 1.13
CMTM4-204ENST00000563952 HBE1P02100 147 aa22.08■■□□□ 1.13
CMTM4-204ENST00000563952 GCSAMLQ5JQS6 135 aa22.08■■□□□ 1.13
CMTM4-204ENST00000563952 HYDINQ4G0P3 5121 aa22.08■■□□□ 1.13
CMTM4-204ENST00000563952 TMEM189A5PLL7 270 aa22.07■■□□□ 1.12
CMTM4-204ENST00000563952 BOLA2-SMG1P6H3BVE0 249 aa22.07■■□□□ 1.12
CMTM4-204ENST00000563952 INSP01308 110 aa22.07■■□□□ 1.12
CMTM4-204ENST00000563952 C12orf74Q32Q52 190 aa22.07■■□□□ 1.12
CMTM4-204ENST00000563952 BAP18Q8IXM2 172 aa22.07■■□□□ 1.12
CMTM4-204ENST00000563952 TRAV10A0A0B4J240 114 aa22.06■■□□□ 1.12
CMTM4-204ENST00000563952 IGLL5B9A064 214 aa22.06■■□□□ 1.12
CMTM4-204ENST00000563952 GUK1Q16774 197 aa22.06■■□□□ 1.12
CMTM4-204ENST00000563952 WDR61Q9GZS3 305 aaKnown RBP22.06■■□□□ 1.12
CMTM4-204ENST00000563952 MBD2Q9UBB5 411 aa22.06■■□□□ 1.12
CMTM4-204ENST00000563952 DNAH1Q9P2D7 4330 aa22.06■■□□□ 1.12
CMTM4-204ENST00000563952 TRAV12-2A0A075B6T6 113 aa22.05■■□□□ 1.12
CMTM4-204ENST00000563952 CRXO43186 299 aaPredicted RBP22.05■■□□□ 1.12
CMTM4-204ENST00000563952 SAT2Q96F10 170 aaPredicted RBP22.05■■□□□ 1.12
CMTM4-204ENST00000563952 ATP5SQ99766 215 aa22.05■■□□□ 1.12
CMTM4-204ENST00000563952 ZNF586Q9NXT0 402 aa22.05■■□□□ 1.12
CMTM4-204ENST00000563952 HSPB11Q9Y547 144 aa22.05■■□□□ 1.12
CMTM4-204ENST00000563952 LOC102723971A0A1B0GUV8 181 aa22.04■■□□□ 1.12
CMTM4-204ENST00000563952 RRN3P1Q2M238 152 aa22.04■■□□□ 1.12
CMTM4-204ENST00000563952 SPART-AS1P0CW21 52 aa22.03■■□□□ 1.12
CMTM4-204ENST00000563952 RPL12P30050 165 aaKnown RBP22.03■■□□□ 1.12
CMTM4-204ENST00000563952 SMIM3Q9BZL3 60 aa22.03■■□□□ 1.12
CMTM4-204ENST00000563952 KCNIP2Q9NS61 270 aa22.03■■□□□ 1.12
CMTM4-204ENST00000563952 PRAC2D3DTV9 90 aa22.02■■□□□ 1.12
CMTM4-204ENST00000563952 OR10J6PQ8NGY7 276 aa22.02■■□□□ 1.12
CMTM4-204ENST00000563952 TMEM14CQ9P0S9 112 aa22.02■■□□□ 1.12
CMTM4-204ENST00000563952 C17orf112F2Z3M2 114 aa22.01■■□□□ 1.11
CMTM4-204ENST00000563952 PYYP10082 97 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms