RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 B2MP61769 119 aa20.48■□□□□ 0.87
NME3-203ENST00000563367 TRAV5A0A0B4J249 113 aa20.47■□□□□ 0.87
NME3-203ENST00000563367 MIFP14174 115 aa20.47■□□□□ 0.87
NME3-203ENST00000563367 PSG9Q00887 426 aa20.47■□□□□ 0.87
NME3-203ENST00000563367 THAP6Q8TBB0 222 aa20.47■□□□□ 0.87
NME3-203ENST00000563367 PXMP4Q9Y6I8 212 aa20.47■□□□□ 0.87
NME3-203ENST00000563367 RYR2Q92736 4967 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 A8MTW9 85 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 ZNF705DP0CH99 300 aaPredicted RBP20.46■□□□□ 0.87
NME3-203ENST00000563367 ZNF705BP0CI00 300 aaPredicted RBP20.46■□□□□ 0.87
NME3-203ENST00000563367 CXCL3P19876 107 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 NANOS2P60321 138 aaKnown RBP20.46■□□□□ 0.87
NME3-203ENST00000563367 CLINT1Q14677 625 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 OR1L4Q8NGR5 311 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 C11orf45Q8TAV5 145 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 NPCDR1Q9BY65 106 aa20.46■□□□□ 0.87
NME3-203ENST00000563367 MPDU1O75352 247 aa20.45■□□□□ 0.86
NME3-203ENST00000563367 CEMP1Q6PRD7 247 aaPredicted RBP20.45■□□□□ 0.86
NME3-203ENST00000563367 BPIFA4PQ86YQ2 179 aa20.45■□□□□ 0.86
NME3-203ENST00000563367 ZNF738Q8NE65 137 aa20.45■□□□□ 0.86
NME3-203ENST00000563367 AMTNQ6UX39 209 aa20.44■□□□□ 0.86
NME3-203ENST00000563367 LRRC20Q8TCA0 184 aa20.44■□□□□ 0.86
NME3-203ENST00000563367 PFDN5Q99471 154 aa20.44■□□□□ 0.86
NME3-203ENST00000563367 NUPR2A6NF83 97 aa20.43■□□□□ 0.86
NME3-203ENST00000563367 H3BTX0 84 aa20.43■□□□□ 0.86
NME3-203ENST00000563367 IGLC2P0DOY2 106 aa20.43■□□□□ 0.86
NME3-203ENST00000563367 PRB4P10163 310 aaPredicted RBP20.43■□□□□ 0.86
NME3-203ENST00000563367 CNN1P51911 297 aaKnown RBP20.43■□□□□ 0.86
NME3-203ENST00000563367 PSG3Q16557 428 aa20.43■□□□□ 0.86
NME3-203ENST00000563367 ZNF705AQ6ZN79 300 aaPredicted RBP20.43■□□□□ 0.86
NME3-203ENST00000563367 MBD2Q9UBB5 411 aa20.43■□□□□ 0.86
NME3-203ENST00000563367 H3BQ15 152 aa20.42■□□□□ 0.86
NME3-203ENST00000563367 PET100P0DJ07 73 aa20.42■□□□□ 0.86
NME3-203ENST00000563367 CXCL2P19875 107 aa20.42■□□□□ 0.86
NME3-203ENST00000563367 GCSAMLQ5JQS6 135 aa20.42■□□□□ 0.86
NME3-203ENST00000563367 LCN15Q6UWW0 184 aa20.42■□□□□ 0.86
NME3-203ENST00000563367 PHLDA1Q8WV24 401 aaPredicted RBP20.42■□□□□ 0.86
NME3-203ENST00000563367 ZNF331Q9NQX6 463 aaPredicted RBP20.42■□□□□ 0.86
NME3-203ENST00000563367 DNAH1Q9P2D7 4330 aa20.42■□□□□ 0.86
NME3-203ENST00000563367 ALMS1Q8TCU4 4167 aa20.41■□□□□ 0.86
NME3-203ENST00000563367 SLC17A3O00476 420 aa20.41■□□□□ 0.86
NME3-203ENST00000563367 WDR61Q9GZS3 305 aaKnown RBP20.41■□□□□ 0.86
NME3-203ENST00000563367 MFFQ9GZY8 342 aa20.41■□□□□ 0.86
NME3-203ENST00000563367 HSPB11Q9Y547 144 aa20.41■□□□□ 0.86
NME3-203ENST00000563367 ZNF705FA8MVS1 300 aaPredicted RBP20.4■□□□□ 0.86
NME3-203ENST00000563367 DUSP14O95147 198 aaKnown RBP20.4■□□□□ 0.86
NME3-203ENST00000563367 OR11H7Q8NGC8 314 aa20.4■□□□□ 0.86
NME3-203ENST00000563367 HRH4Q9H3N8 390 aa20.4■□□□□ 0.86
NME3-203ENST00000563367 IGHV3OR16-12A0A075B7B8 117 aa20.39■□□□□ 0.85
NME3-203ENST00000563367 RPL12P30050 165 aaKnown RBP20.39■□□□□ 0.85
NME3-203ENST00000563367 SAT2Q96F10 170 aaPredicted RBP20.39■□□□□ 0.85
NME3-203ENST00000563367 SLC50A1Q9BRV3 221 aa20.39■□□□□ 0.85
NME3-203ENST00000563367 FCN2Q15485 313 aa20.38■□□□□ 0.85
NME3-203ENST00000563367 C1orf158Q8N1D5 194 aa20.38■□□□□ 0.85
NME3-203ENST00000563367 OR8A1Q8NGG7 326 aa20.38■□□□□ 0.85
NME3-203ENST00000563367 RPUSD4Q96CM3 377 aaKnown RBP20.38■□□□□ 0.85
NME3-203ENST00000563367 NEU1Q99519 415 aa20.38■□□□□ 0.85
NME3-203ENST00000563367 ATP5SQ99766 215 aa20.38■□□□□ 0.85
NME3-203ENST00000563367 JTBO76095 146 aa20.37■□□□□ 0.85
NME3-203ENST00000563367 HIST1H1AQ02539 215 aaPredicted RBP20.37■□□□□ 0.85
NME3-203ENST00000563367 SMIM3Q9BZL3 60 aa20.37■□□□□ 0.85
NME3-203ENST00000563367 MED28Q9H204 178 aa20.37■□□□□ 0.85
NME3-203ENST00000563367 ZNF586Q9NXT0 402 aa20.37■□□□□ 0.85
NME3-203ENST00000563367 M0R2Z0 102 aa20.36■□□□□ 0.85
NME3-203ENST00000563367 SPINK13Q1W4C9 94 aa20.36■□□□□ 0.85
NME3-203ENST00000563367 CELA1Q9UNI1 258 aa20.36■□□□□ 0.85
NME3-203ENST00000563367 KLK5Q9Y337 293 aaPredicted RBP20.36■□□□□ 0.85
NME3-203ENST00000563367 CRXO43186 299 aaPredicted RBP20.34■□□□□ 0.85
NME3-203ENST00000563367 GUK1Q16774 197 aa20.34■□□□□ 0.85
NME3-203ENST00000563367 IGF2BP2-AS1Q96M15 143 aa20.34■□□□□ 0.85
NME3-203ENST00000563367 WFDC1Q9HC57 220 aa20.34■□□□□ 0.85
NME3-203ENST00000563367 TMEM14CQ9P0S9 112 aa20.34■□□□□ 0.85
NME3-203ENST00000563367 GOLT1BQ9Y3E0 138 aa20.34■□□□□ 0.85
NME3-203ENST00000563367 HYDINQ4G0P3 5121 aa20.34■□□□□ 0.85
NME3-203ENST00000563367 SMIM9A6NGZ8 99 aa20.33■□□□□ 0.85
NME3-203ENST00000563367 PRAC2D3DTV9 90 aa20.33■□□□□ 0.85
NME3-203ENST00000563367 MIR17HGQ75NE6 70 aa20.33■□□□□ 0.85
NME3-203ENST00000563367 PYYP10082 97 aa20.32■□□□□ 0.84
NME3-203ENST00000563367 RHOBP62745 196 aa20.32■□□□□ 0.84
NME3-203ENST00000563367 FAM167A-AS1Q96KT0 104 aa20.32■□□□□ 0.84
NME3-203ENST00000563367 SLC25A2Q9BXI2 301 aa20.32■□□□□ 0.84
NME3-203ENST00000563367 KCNIP2Q9NS61 270 aa20.32■□□□□ 0.84
NME3-203ENST00000563367 BOLA2-SMG1P6H3BVE0 249 aa20.31■□□□□ 0.84
NME3-203ENST00000563367 AMBPP02760 352 aa20.31■□□□□ 0.84
NME3-203ENST00000563367 BAP18Q8IXM2 172 aa20.31■□□□□ 0.84
NME3-203ENST00000563367 TRBV19A0A075B6N1 114 aa20.3■□□□□ 0.84
NME3-203ENST00000563367 TRAV12-2A0A075B6T6 113 aa20.3■□□□□ 0.84
NME3-203ENST00000563367 C17orf112F2Z3M2 114 aa20.3■□□□□ 0.84
NME3-203ENST00000563367 HIST1H1EP10412 219 aaKnown RBP20.3■□□□□ 0.84
NME3-203ENST00000563367 Q6ZTC4 211 aa20.3■□□□□ 0.84
NME3-203ENST00000563367 RFNGQ9Y644 331 aa20.3■□□□□ 0.84
NME3-203ENST00000563367 ZNF253O75346 499 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 NDUFB4O95168 129 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 IFNA5P01569 189 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 EMP1P54849 157 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 RGS21Q2M5E4 152 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 C12orf74Q32Q52 190 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 ZNF767PQ75MW2 155 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 SCGB1C1Q8TD33 95 aa20.29■□□□□ 0.84
NME3-203ENST00000563367 INSP01308 110 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms