RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 ZNF738Q8NE65 137 aa17.13■□□□□ 0.33
SMPD3-202ENST00000561749 RNF183Q96D59 192 aa17.13■□□□□ 0.33
SMPD3-202ENST00000561749 NBEAL2Q6ZNJ1 2754 aa17.13■□□□□ 0.33
SMPD3-202ENST00000561749 SLC17A3O00476 420 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 ARPC5O15511 151 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 GIG44P09565 113 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-202ENST00000561749 PYYP10082 97 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 EBLN2Q6P2I7 272 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 LCN15Q6UWW0 184 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 OR4B1Q8NGF8 309 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 SLC25A2Q9BXI2 301 aa17.12■□□□□ 0.33
SMPD3-202ENST00000561749 SPP1P10451 314 aa17.11■□□□□ 0.33
SMPD3-202ENST00000561749 ZNF266Q14584 549 aa17.11■□□□□ 0.33
SMPD3-202ENST00000561749 MORN3Q6PF18 240 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-202ENST00000561749 Q6ZNX1 250 aa17.11■□□□□ 0.33
SMPD3-202ENST00000561749 ZNF331Q9NQX6 463 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-202ENST00000561749 ZNF586Q9NXT0 402 aa17.11■□□□□ 0.33
SMPD3-202ENST00000561749 TP53TG1Q9Y2A0 90 aa17.11■□□□□ 0.33
SMPD3-202ENST00000561749 A0A0J9YX75 114 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 ZNF705DP0CH99 300 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-202ENST00000561749 ZNF705BP0CI00 300 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-202ENST00000561749 FXYD7P58549 80 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 FAM167A-AS1Q96KT0 104 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 HRH4Q9H3N8 390 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 EDA2RQ9HAV5 297 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 CLEC5AQ9NY25 188 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 FUT9Q9Y231 359 aa17.1■□□□□ 0.33
SMPD3-202ENST00000561749 EIF3GO75821 320 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMPD3-202ENST00000561749 CXCL2P19875 107 aa17.09■□□□□ 0.33
SMPD3-202ENST00000561749 PSG3Q16557 428 aa17.09■□□□□ 0.33
SMPD3-202ENST00000561749 RPL7L1Q6DKI1 246 aaKnown RBP17.09■□□□□ 0.33
SMPD3-202ENST00000561749 SLC50A1Q9BRV3 221 aa17.09■□□□□ 0.33
SMPD3-202ENST00000561749 MRPL32Q9BYC8 188 aaKnown RBP17.09■□□□□ 0.33
SMPD3-202ENST00000561749 TMEM14CQ9P0S9 112 aa17.09■□□□□ 0.33
SMPD3-202ENST00000561749 TIMM9Q9Y5J7 89 aa17.09■□□□□ 0.33
SMPD3-202ENST00000561749 ATP6V0CP27449 155 aa17.08■□□□□ 0.32
SMPD3-202ENST00000561749 RAB2AP61019 212 aa17.08■□□□□ 0.32
SMPD3-202ENST00000561749 SAT2Q96F10 170 aaPredicted RBP17.08■□□□□ 0.32
SMPD3-202ENST00000561749 MFFQ9GZY8 342 aa17.08■□□□□ 0.32
SMPD3-202ENST00000561749 XCL2Q9UBD3 114 aa17.08■□□□□ 0.32
SMPD3-202ENST00000561749 STAB2Q8WWQ8 2551 aa17.08■□□□□ 0.32
SMPD3-202ENST00000561749 hCG_2014768A0A024R1R8 64 aa17.07■□□□□ 0.32
SMPD3-202ENST00000561749 OR11H4Q8NGC9 324 aa17.07■□□□□ 0.32
SMPD3-202ENST00000561749 BLNKQ8WV28 456 aa17.07■□□□□ 0.32
SMPD3-202ENST00000561749 ZNF705FA8MVS1 300 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-202ENST00000561749 HIST1H1EP10412 219 aaKnown RBP17.06■□□□□ 0.32
SMPD3-202ENST00000561749 NUTF2P61970 127 aaKnown RBP17.06■□□□□ 0.32
SMPD3-202ENST00000561749 RHOBP62745 196 aa17.06■□□□□ 0.32
SMPD3-202ENST00000561749 GUK1Q16774 197 aa17.06■□□□□ 0.32
SMPD3-202ENST00000561749 ACOT6Q3I5F7 207 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-202ENST00000561749 OR11H2Q8NH07 326 aa17.06■□□□□ 0.32
SMPD3-202ENST00000561749 RPUSD4Q96CM3 377 aaKnown RBP17.06■□□□□ 0.32
SMPD3-202ENST00000561749 SLC35B3Q9H1N7 401 aa17.06■□□□□ 0.32
SMPD3-202ENST00000561749 SH3BGRL3Q9H299 93 aa17.06■□□□□ 0.32
SMPD3-202ENST00000561749 TRBV19A0A075B6N1 114 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 BORCS7-ASMTA0A0B4J1R7 106 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 OR10J4P0C629 311 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 CNN1P51911 297 aaKnown RBP17.05■□□□□ 0.32
SMPD3-202ENST00000561749 HIST1H1AQ02539 215 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-202ENST00000561749 FAM122CQ6P4D5 195 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 RARRES2Q99969 163 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 PAXXQ9BUH6 204 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 OR51M1Q9H341 326 aa17.05■□□□□ 0.32
SMPD3-202ENST00000561749 OR7C2O60412 319 aa17.04■□□□□ 0.32
SMPD3-202ENST00000561749 M6PRP20645 277 aa17.04■□□□□ 0.32
SMPD3-202ENST00000561749 PSG9Q00887 426 aa17.04■□□□□ 0.32
SMPD3-202ENST00000561749 A0A0J9YWU9 116 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 PRAC2D3DTV9 90 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 DUSP14O95147 198 aaKnown RBP17.03■□□□□ 0.32
SMPD3-202ENST00000561749 NDUFB4O95168 129 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 TMEM41BQ5BJD5 291 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 OR8A1Q8NGG7 326 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 OR10G4Q8NGN3 311 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 OR10G9Q8NGN4 311 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 OR10G7Q8NGN6 311 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 ZNF503Q96F45 646 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 ST6GAL2Q96JF0 529 aa17.03■□□□□ 0.32
SMPD3-202ENST00000561749 PSMG3Q9BT73 122 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-202ENST00000561749 CSNK1G2-AS1Q8NCQ2 148 aa17.02■□□□□ 0.32
SMPD3-202ENST00000561749 OR2G3Q8NGZ4 309 aa17.02■□□□□ 0.32
SMPD3-202ENST00000561749 RNF141Q8WVD5 230 aa17.02■□□□□ 0.32
SMPD3-202ENST00000561749 FXYD5Q96DB9 178 aa17.02■□□□□ 0.32
SMPD3-202ENST00000561749 CLUHP3Q96NS8 147 aa17.02■□□□□ 0.32
SMPD3-202ENST00000561749 C1QTNF4Q9BXJ3 329 aa17.02■□□□□ 0.32
SMPD3-202ENST00000561749 A0A1W2PPV4 95 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 A8MTW9 85 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 HMGB3O15347 200 aaKnown RBP17.01■□□□□ 0.31
SMPD3-202ENST00000561749 ZNF253O75346 499 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 NBEAP1P0C6P0 100 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 KHDC3LQ587J8 217 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 AMTNQ6UX39 209 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 EXOC3-AS1Q8N2X6 119 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 MUC7Q8TAX7 377 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 CYTL1Q9NRR1 136 aa17.01■□□□□ 0.31
SMPD3-202ENST00000561749 M0R3E3 92 aa17■□□□□ 0.31
SMPD3-202ENST00000561749 TAS2R45P59539 299 aa17■□□□□ 0.31
SMPD3-202ENST00000561749 UBE2L3P68036 154 aaKnown RBP17■□□□□ 0.31
SMPD3-202ENST00000561749 KCNRGQ8N5I3 272 aa17■□□□□ 0.31
SMPD3-202ENST00000561749 HMSDA8MTL9 139 aa16.99■□□□□ 0.31
SMPD3-202ENST00000561749 TAAR5O14804 337 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms