RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 IL7P13232 177 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
SNX1-213ENST00000561026 PSG3Q16557 428 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 PXDC1Q5TGL8 231 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 Q6ZR54 194 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 PKHD1P08F94 4074 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 IGLV2-18A0A075B6J9 118 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 C7orf66A4D0T2 115 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 GOSR2O14653 212 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 MRPS12O15235 138 aaKnown RBP11.45□□□□□ -0.58
SNX1-213ENST00000561026 MBPP02686 304 aaPredicted RBP11.45□□□□□ -0.58
SNX1-213ENST00000561026 RHOBP62745 196 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 CNPY1Q3B7I2 92 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 ZNF546Q86UE3 836 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 LRRC20Q8TCA0 184 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 GGACTQ9BVM4 153 aa11.45□□□□□ -0.58
SNX1-213ENST00000561026 PLAC8L1A1L4L8 177 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 AGPAT2O15120 278 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 AZU1P20160 251 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 LINC00305Q7Z4B0 112 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 LINC01587Q99440 93 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 PPP1R14DQ9NXH3 145 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 PCLOQ9Y6V0 5065 aa11.44□□□□□ -0.58
SNX1-213ENST00000561026 DEFB130BP0DP73 79 aa11.43□□□□□ -0.58
SNX1-213ENST00000561026 DEFB130AP0DP74 79 aa11.43□□□□□ -0.58
SNX1-213ENST00000561026 CXCL2P19875 107 aa11.43□□□□□ -0.58
SNX1-213ENST00000561026 TMEM256Q8N2U0 113 aa11.43□□□□□ -0.58
SNX1-213ENST00000561026 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
SNX1-213ENST00000561026 RPUSD4Q96CM3 377 aaKnown RBP11.43□□□□□ -0.58
SNX1-213ENST00000561026 ZNF331Q9NQX6 463 aaPredicted RBP11.43□□□□□ -0.58
SNX1-213ENST00000561026 DNAH17Q9UFH2 4485 aa11.43□□□□□ -0.58
SNX1-213ENST00000561026 PLA2G10O15496 165 aa11.42□□□□□ -0.58
SNX1-213ENST00000561026 PRB4P10163 310 aaPredicted RBP11.42□□□□□ -0.58
SNX1-213ENST00000561026 TAS2R60P59551 318 aa11.42□□□□□ -0.58
SNX1-213ENST00000561026 FCN2Q15485 313 aa11.42□□□□□ -0.58
SNX1-213ENST00000561026 LCN15Q6UWW0 184 aa11.42□□□□□ -0.58
SNX1-213ENST00000561026 TMEM37Q8WXS4 190 aa11.42□□□□□ -0.58
SNX1-213ENST00000561026 C20orf85Q9H1P6 137 aa11.42□□□□□ -0.58
SNX1-213ENST00000561026 SNRPCP09234 159 aaKnown RBP11.41□□□□□ -0.58
SNX1-213ENST00000561026 CDKN1BP46527 198 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 BPIFA4PQ86YQ2 179 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 MGST2Q99735 147 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 L7N2F9 121 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 CCSO14618 274 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 LYRM1O43325 122 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 COX7A2P2O60397 106 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 HTN1P15515 57 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
SNX1-213ENST00000561026 VAMP2P63027 116 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 ZNF846Q147U1 533 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 SLC50A1Q9BRV3 221 aa11.41□□□□□ -0.58
SNX1-213ENST00000561026 CBY3A6NI87 242 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 F5H768 121 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 TCRBP04435 133 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 SOHLH1Q5JUK2 328 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 MORN5Q5VZ52 161 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 C10orf113Q5VZT2 155 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 C16orf74Q96GX8 76 aa11.4□□□□□ -0.59
SNX1-213ENST00000561026 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.59
SNX1-213ENST00000561026 NACAE9PAV3 2078 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 FAM25EA8MYX2 175 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 SLC17A3O00476 420 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 ATP5G1P05496 136 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 MED14OSP0DP75 135 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 ATP5G3P48201 142 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 CAMLGP49069 296 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 BCAP31P51572 246 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 RAB31Q13636 194 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 OPCMLQ14982 345 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 C1orf134Q5TEV5 83 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 ZNF493Q6ZR52 646 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 ZNF431Q8TF32 576 aaPredicted RBP11.39□□□□□ -0.59
SNX1-213ENST00000561026 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 DNAJC4Q9NNZ3 241 aa11.39□□□□□ -0.59
SNX1-213ENST00000561026 LSM5Q9Y4Y9 91 aaKnown RBP11.39□□□□□ -0.59
SNX1-213ENST00000561026 TRAV6A0A075B6T7 132 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 C5orf51A6NDU8 294 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 H3BQ15 152 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 H3BTX0 84 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 H7BYZ3 331 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 CST7O76096 145 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 CAV2P51636 162 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 Q6ZRG5 221 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 NRARPQ7Z6K4 114 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
SNX1-213ENST00000561026 SAT2Q96F10 170 aaPredicted RBP11.38□□□□□ -0.59
SNX1-213ENST00000561026 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 C11orf1Q9H5F2 150 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 PXMP4Q9Y6I8 212 aa11.38□□□□□ -0.59
SNX1-213ENST00000561026 PKD1P98161 4303 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 FAM24AA6NFZ4 105 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 NUDT3O95989 172 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 KIR3DS1Q14943 382 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
SNX1-213ENST00000561026 C2orf50Q96LR7 162 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms