RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 RFNGQ9Y644 331 aa8.8□□□□□ -1
USP8-212ENST00000560730 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
USP8-212ENST00000560730 H3BQ15 152 aa8.79□□□□□ -1
USP8-212ENST00000560730 ZNF705DP0CH99 300 aaPredicted RBP8.79□□□□□ -1
USP8-212ENST00000560730 ZNF705BP0CI00 300 aaPredicted RBP8.79□□□□□ -1
USP8-212ENST00000560730 SPATA31B1PQ5VZV4 182 aa8.79□□□□□ -1
USP8-212ENST00000560730 BPIFA4PQ86YQ2 179 aa8.79□□□□□ -1
USP8-212ENST00000560730 PFDN5Q99471 154 aa8.79□□□□□ -1
USP8-212ENST00000560730 SLC17A3O00476 420 aa8.78□□□□□ -1
USP8-212ENST00000560730 DEFB4AO15263 64 aa8.78□□□□□ -1
USP8-212ENST00000560730 GIPP09681 153 aaPredicted RBP8.78□□□□□ -1
USP8-212ENST00000560730 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
USP8-212ENST00000560730 ZNF709Q8N972 641 aa8.78□□□□□ -1
USP8-212ENST00000560730 IL17DQ8TAD2 202 aa8.78□□□□□ -1
USP8-212ENST00000560730 LRRC20Q8TCA0 184 aa8.78□□□□□ -1
USP8-212ENST00000560730 CLUHP3Q96NS8 147 aa8.78□□□□□ -1
USP8-212ENST00000560730 SLC35B3Q9H1N7 401 aa8.78□□□□□ -1
USP8-212ENST00000560730 RNF24Q9Y225 148 aa8.78□□□□□ -1
USP8-212ENST00000560730 A8MTW9 85 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 PSG3Q16557 428 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 TMEM41BQ5BJD5 291 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 AMTNQ6UX39 209 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 ZNF738Q8NE65 137 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 SAT2Q96F10 170 aaPredicted RBP8.77□□□□□ -1.01
USP8-212ENST00000560730 ZNF331Q9NQX6 463 aaPredicted RBP8.77□□□□□ -1.01
USP8-212ENST00000560730 X6R8D5 127 aa8.77□□□□□ -1.01
USP8-212ENST00000560730 TENM2Q9NT68 2774 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 ZNF705FA8MVS1 300 aaPredicted RBP8.76□□□□□ -1.01
USP8-212ENST00000560730 IFNA5P01569 189 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 RBMY1A1P0DJD3 496 aaKnown RBP8.76□□□□□ -1.01
USP8-212ENST00000560730 RBMY1CP0DJD4 496 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 PYYP10082 97 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 NUTF2P61970 127 aaKnown RBP8.76□□□□□ -1.01
USP8-212ENST00000560730 PSG9Q00887 426 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
USP8-212ENST00000560730 LCN15Q6UWW0 184 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 MIR17HGQ75NE6 70 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 Q8NAQ8 132 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 FAM167A-AS1Q96KT0 104 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 HRH4Q9H3N8 390 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 ZNF586Q9NXT0 402 aa8.76□□□□□ -1.01
USP8-212ENST00000560730 IGHV4-28A0A0C4DH34 117 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 ZNF705EA8MWA4 302 aaPredicted RBP8.75□□□□□ -1.01
USP8-212ENST00000560730 G3V3Q6 166 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 CXCL2P19875 107 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 CNN1P51911 297 aaKnown RBP8.75□□□□□ -1.01
USP8-212ENST00000560730 FFAR4Q5NUL3 377 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 SCGB1C1Q8TD33 95 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 RPUSD4Q96CM3 377 aaKnown RBP8.75□□□□□ -1.01
USP8-212ENST00000560730 AQP10Q96PS8 301 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 PARD6GQ9BYG4 376 aaPredicted RBP8.75□□□□□ -1.01
USP8-212ENST00000560730 MFFQ9GZY8 342 aa8.75□□□□□ -1.01
USP8-212ENST00000560730 CSMD3Q7Z407 3707 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 PRAC2D3DTV9 90 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 C17orf112F2Z3M2 114 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 OR8A1Q8NGG7 326 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 OR2T35Q8NGX2 323 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 C1QTNF4Q9BXJ3 329 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
USP8-212ENST00000560730 KCNIP2Q9NS61 270 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 TMEM14CQ9P0S9 112 aa8.74□□□□□ -1.01
USP8-212ENST00000560730 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 FXYD6-FXYD2A0A087WZ82 144 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 RNF222A6NCQ9 220 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 M0R2Z0 102 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
USP8-212ENST00000560730 NDUFB4O95168 129 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 HIST1H1EP10412 219 aaKnown RBP8.73□□□□□ -1.01
USP8-212ENST00000560730 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
USP8-212ENST00000560730 PMS2P11Q13670 270 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 FUT9Q9Y231 359 aa8.73□□□□□ -1.01
USP8-212ENST00000560730 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 SMLR1H3BR10 107 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP8-212ENST00000560730 MIFP14174 115 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 NANOS2P60321 138 aaKnown RBP8.72□□□□□ -1.01
USP8-212ENST00000560730 GUK1Q16774 197 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 SPINK13Q1W4C9 94 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
USP8-212ENST00000560730 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 BLNKQ8WV28 456 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 ZNF503Q96F45 646 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 TNFSF18Q9UNG2 199 aa8.72□□□□□ -1.01
USP8-212ENST00000560730 CXorf65A6NEN9 183 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 CRXO43186 299 aaPredicted RBP8.71□□□□□ -1.01
USP8-212ENST00000560730 OR10J4P0C629 311 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 RHOBP62745 196 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 HSD17B11Q8NBQ5 300 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 FXYD5Q96DB9 178 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 PAXXQ9BUH6 204 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 MRPL32Q9BYC8 188 aaKnown RBP8.71□□□□□ -1.01
USP8-212ENST00000560730 OR51M1Q9H341 326 aa8.71□□□□□ -1.01
USP8-212ENST00000560730 TRAV12-2A0A075B6T6 113 aa8.71□□□□□ -1.02
USP8-212ENST00000560730 M0R3E3 92 aa8.71□□□□□ -1.02
USP8-212ENST00000560730 ZNF253O75346 499 aa8.71□□□□□ -1.02
USP8-212ENST00000560730 NBEAP1P0C6P0 100 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms