RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 FCN2Q15485 313 aa7.25□□□□□ -1.25
LDLR-214ENST00000560628 CNPY1Q3B7I2 92 aa7.25□□□□□ -1.25
LDLR-214ENST00000560628 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
LDLR-214ENST00000560628 OR8A1Q8NGG7 326 aa7.25□□□□□ -1.25
LDLR-214ENST00000560628 LINC01587Q99440 93 aa7.25□□□□□ -1.25
LDLR-214ENST00000560628 SEC22CQ9BRL7 303 aa7.25□□□□□ -1.25
LDLR-214ENST00000560628 LSM5Q9Y4Y9 91 aaKnown RBP7.25□□□□□ -1.25
LDLR-214ENST00000560628 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 A0A087X0K7 114 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 C5orf51A6NDU8 294 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 FAM24AA6NFZ4 105 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 H3BTX0 84 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 BOLA2-SMG1P6H3BVE0 249 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 K7EPK0 472 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 MRPS12O15235 138 aaKnown RBP7.24□□□□□ -1.25
LDLR-214ENST00000560628 CST7O76096 145 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 DEFB130BP0DP73 79 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 DEFB130AP0DP74 79 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 HTN1P15515 57 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 OXA1LQ15070 435 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 TMEM88Q6PEY1 159 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 LINC00305Q7Z4B0 112 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 S100A7AQ86SG5 101 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 ZNF546Q86UE3 836 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 RPUSD4Q96CM3 377 aaKnown RBP7.24□□□□□ -1.25
LDLR-214ENST00000560628 FAM210BQ96KR6 192 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 MGST2Q99735 147 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 GGACTQ9BVM4 153 aa7.24□□□□□ -1.25
LDLR-214ENST00000560628 COX7A2P2O60397 106 aa7.23□□□□□ -1.25
LDLR-214ENST00000560628 CAV2P51636 162 aa7.23□□□□□ -1.25
LDLR-214ENST00000560628 PXDC1Q5TGL8 231 aa7.23□□□□□ -1.25
LDLR-214ENST00000560628 MORN5Q5VZ52 161 aa7.23□□□□□ -1.25
LDLR-214ENST00000560628 C12orf45Q8N5I9 185 aaPredicted RBP7.23□□□□□ -1.25
LDLR-214ENST00000560628 ZNF431Q8TF32 576 aaPredicted RBP7.23□□□□□ -1.25
LDLR-214ENST00000560628 TMEM37Q8WXS4 190 aa7.23□□□□□ -1.25
LDLR-214ENST00000560628 NUDT15Q9NV35 164 aa7.23□□□□□ -1.25
LDLR-214ENST00000560628 TRAV5A0A0B4J249 113 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 RTL8CO15255 209 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 H2AFB2P0C5Z0 115 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 CAMLGP49069 296 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 B2MP61769 119 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 KIR3DS1Q14943 382 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 OPCMLQ14982 345 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 C10orf113Q5VZT2 155 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 MIC13Q5XKP0 118 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 LINC00336Q6ZUF6 198 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 NRARPQ7Z6K4 114 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 C2orf50Q96LR7 162 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 PARD6GQ9BYG4 376 aaPredicted RBP7.22□□□□□ -1.25
LDLR-214ENST00000560628 DNAJC4Q9NNZ3 241 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 ZNF331Q9NQX6 463 aaPredicted RBP7.22□□□□□ -1.25
LDLR-214ENST00000560628 NDUFA13Q9P0J0 144 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 RNF24Q9Y225 148 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 DNAH6Q9C0G6 4158 aa7.22□□□□□ -1.25
LDLR-214ENST00000560628 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 PRSS29PA6NIE9 313 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 LYRM9A8MSI8 78 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 F5H768 121 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 H3BQ15 152 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 SLC17A3O00476 420 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 TAS2R60P59551 318 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 S100A10P60903 97 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 RAB31Q13636 194 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 LGALS9BQ3B8N2 356 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 LCN15Q6UWW0 184 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 Q6ZRG5 221 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 BPIFA4PQ86YQ2 179 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 KRTAP17-1Q9BYP8 105 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 C11orf1Q9H5F2 150 aa7.21□□□□□ -1.26
LDLR-214ENST00000560628 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 FAM240BA0A1B0GVZ2 78 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 CXCL2P19875 107 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 TSPOP30536 169 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 CDKN1BP46527 198 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 RAB32Q13637 225 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 RNF212Q495C1 297 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 TMEM256Q8N2U0 113 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 OR10J6PQ8NGY7 276 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 SLC50A1Q9BRV3 221 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
LDLR-214ENST00000560628 UQCC1Q9NVA1 299 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 WDR83OSQ9Y284 106 aa7.2□□□□□ -1.26
LDLR-214ENST00000560628 UBE2L5PA0A1B0GUS4 154 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 IGSF23A1L1A6 192 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 CBY3A6NI87 242 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 J3KRW8 73 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 NUDT3O95989 172 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 IGLC2P0DOY2 106 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 PVALBP20472 110 aaPredicted RBP7.19□□□□□ -1.26
LDLR-214ENST00000560628 BAXQ07812 192 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 IL15RAQ13261 267 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 Q6ZR54 194 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 TMEM252Q8N6L7 170 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 C15orf53Q8NAA6 179 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 OR1L4Q8NGR5 311 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 SAT2Q96F10 170 aaPredicted RBP7.19□□□□□ -1.26
LDLR-214ENST00000560628 ATG101Q9BSB4 218 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 CCDC32Q9BV29 185 aa7.19□□□□□ -1.26
LDLR-214ENST00000560628 TIMM8BQ9Y5J9 83 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms