RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 H3BTX0 84 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 MPDU1O75352 247 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 DUSP14O95147 198 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 RHOBP62745 196 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 PRR20EP86478 221 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 PRR20CP86479 221 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 PRR20DP86480 221 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 PRR20BP86481 221 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 PRR20AP86496 221 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 OPCMLQ14982 345 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 MORN5Q5VZ52 161 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 ZNF709Q8N972 641 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 ALG5Q9Y673 324 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 X6R8D5 127 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 CSMD3Q7Z407 3707 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 MPC2O95563 127 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 CXCL3P19876 107 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 CNN1P51911 297 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 HIST1H1AQ02539 215 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 PSG3Q16557 428 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 TMEM208Q9BTX3 173 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 GOLT1BQ9Y3E0 138 aa9.4□□□□□ -0.9
CTDSPL2-209ENST00000560620 TRAV5A0A0B4J249 113 aa9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 C17orf112F2Z3M2 114 aa9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 CXCL2P19875 107 aa9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 EMP1P54849 157 aa9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 RPUSD4Q96CM3 377 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 MED28Q9H204 178 aa9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 KCNIP2Q9NS61 270 aa9.39□□□□□ -0.91
CTDSPL2-209ENST00000560620 M0R2Z0 102 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 MRPS12O15235 138 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 RPL12P30050 165 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 CHAC2Q8WUX2 184 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 ATP5SQ99766 215 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 RNF126Q9BV68 326 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 HRH4Q9H3N8 390 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 ZNF331Q9NQX6 463 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 MBD2Q9UBB5 411 aa9.38□□□□□ -0.91
CTDSPL2-209ENST00000560620 SLC17A3O00476 420 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 IFNA5P01569 189 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 HBE1P02100 147 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 AMBPP02760 352 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 GUK1Q16774 197 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 GCSAMLQ5JQS6 135 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 ZNF705AQ6ZN79 300 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 OR11H7Q8NGC8 314 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 OR8A1Q8NGG7 326 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 SCGB1C1Q8TD33 95 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 WDR61Q9GZS3 305 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 HSPB11Q9Y547 144 aa9.37□□□□□ -0.91
CTDSPL2-209ENST00000560620 TRAV12-2A0A075B6T6 113 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 SMIM9A6NGZ8 99 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 ZNF705FA8MVS1 300 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 H3BQ15 152 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 LY6G6CO95867 125 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 INSP01308 110 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 IGLC2P0DOY2 106 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 ZNF767PQ75MW2 155 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 BLNKQ8WV28 456 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 IGF2BP2-AS1Q96M15 143 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 NEU1Q99519 415 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 TIMM9Q9Y5J7 89 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
CTDSPL2-209ENST00000560620 TMEM189A5PLL7 270 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 BOLA2-SMG1P6H3BVE0 249 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 FCN2Q15485 313 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 RRN3P1Q2M238 152 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 Q6ZTC4 211 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 C2CD4CQ8TF44 421 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 CELA1Q9UNI1 258 aa9.35□□□□□ -0.91
CTDSPL2-209ENST00000560620 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 A8MTW9 85 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 IGLL5B9A064 214 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 SPART-AS1P0CW21 52 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 PYYP10082 97 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 HTN1P15515 57 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 RGS21Q2M5E4 152 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 FFAR4Q5NUL3 377 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 MIR17HGQ75NE6 70 aa9.34□□□□□ -0.91
CTDSPL2-209ENST00000560620 RYR2Q92736 4967 aa9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 TRBV19A0A075B6N1 114 aa9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 TRAV10A0A0B4J240 114 aa9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 HIST1H1EP10412 219 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms