RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 UNQ9165/PRO28630Q6UXU0 137 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 C8orf86Q6ZUL3 223 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 SLC7A5P1Q8MH63 180 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 LYPD1Q8N2G4 141 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 TCEAL7Q9BRU2 100 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 RHPN1-AS1Q9BWJ2 59 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 TMPRSS5Q9H3S3 457 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 CLEC5AQ9NY25 188 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 SMPXQ9UHP9 88 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 U3KQE9 123 aa4.92□□□□□ -1.62
SPG11-221ENST00000560299 LOC102723971A0A1B0GUV8 181 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 KRBOX1C9JBD0 128 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 C11orf94C9JXX5 98 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 ZNF253O75346 499 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 EIF3GO75821 320 aaKnown RBP eCLIP4.91□□□□□ -1.62
SPG11-221ENST00000560299 PF4P02776 101 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 PYYP10082 97 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 GP9P14770 177 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 SLURP1P55000 103 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 UBE2G2P60604 165 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 RPL11P62913 178 aaKnown RBP4.91□□□□□ -1.62
SPG11-221ENST00000560299 PAFAH1B2P68402 229 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 DEFB136Q30KP8 78 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 NSUN5P1Q3KNT7 163 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 TM4SF20Q53R12 229 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 SIGLEC15Q6ZMC9 328 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 OR9G4Q8NGQ1 327 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 RXFP4Q8TDU9 374 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 BLNKQ8WV28 456 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 RPUSD4Q96CM3 377 aaKnown RBP4.91□□□□□ -1.62
SPG11-221ENST00000560299 FXYD5Q96DB9 178 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 ZNF503Q96F45 646 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 RAX2Q96IS3 184 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 SLC50A1Q9BRV3 221 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 SLC35B3Q9H1N7 401 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 AAMDCQ9H7C9 122 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
SPG11-221ENST00000560299 WNK1Q9H4A3 2382 aa4.9□□□□□ -1.62
SPG11-221ENST00000560299 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 A0A087X0K7 114 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 IGHV3-49A0A0A0MS15 119 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 IGHV3-66A0A0C4DH42 116 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 SCO2A0A1W2PP80 73 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 PGPA6NDG6 321 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 C2orf70A6NJV1 201 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 FAM74A7A6NL05 159 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 TMEM250H0YL14 139 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 K7EQM0 130 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 OVOL1O14753 267 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 CHEK1O14757 476 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 IGLC2P0DOY2 106 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 S100A1P23297 94 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 CBLN1P23435 193 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 CSN1S1P47710 185 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 RANP62826 216 aaKnown RBP4.9□□□□□ -1.63
SPG11-221ENST00000560299 SUMO1P63165 101 aaKnown RBP4.9□□□□□ -1.63
SPG11-221ENST00000560299 FHL3Q13643 280 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 ICAM4Q14773 271 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 C18orf65Q6ZTR6 163 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 CMTM2Q8TAZ6 248 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 DYNLRB2Q8TF09 96 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 DLX4Q92988 240 aaPredicted RBP4.9□□□□□ -1.63
SPG11-221ENST00000560299 RARRES2Q99969 163 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 OTORQ9NRC9 128 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 ZNF586Q9NXT0 402 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 NOTCH1P46531 2555 aa4.9□□□□□ -1.63
SPG11-221ENST00000560299 IGHV3OR16-13A0A075B7E8 117 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 IGHV3-74A0A0B4J1X5 117 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 TMEM213A2RRL7 107 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 TMEM218A2RU14 115 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 F8W036 122 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 H3BQ15 152 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 DNASE2O00115 360 aaPredicted RBP4.89□□□□□ -1.63
SPG11-221ENST00000560299 APOHP02749 345 aaPredicted RBP4.89□□□□□ -1.63
SPG11-221ENST00000560299 SLC25A5P05141 298 aaKnown RBP4.89□□□□□ -1.63
SPG11-221ENST00000560299 S100A9P06702 114 aaKnown RBP4.89□□□□□ -1.63
SPG11-221ENST00000560299 FOLR2P14207 255 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 ID1P41134 155 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 CEBPGP53567 150 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 FAM74A3Q4VXF1 159 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 RBPMS2Q6ZRY4 209 aaKnown RBP4.89□□□□□ -1.63
SPG11-221ENST00000560299 TCF24Q7RTU0 167 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 ARL6IP6Q8N6S5 226 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 C5orf17Q8NAS9 161 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 WFDC9Q8NEX5 89 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 GLMPQ8WWB7 406 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 HIST1H2BAQ96A08 127 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 ZNF414Q96IQ9 312 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 C16orf92Q96LL3 132 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 DUX3Q96PT4 197 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 Q9H3A6 140 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 NRN1Q9NPD7 142 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 SIGLEC8Q9NYZ4 499 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 PRELID1Q9Y255 219 aa4.89□□□□□ -1.63
SPG11-221ENST00000560299 TRAV25A0A0B4J276 109 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 SERTM2A0A1B0GWG4 89 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 MRPS12O15235 138 aaKnown RBP4.88□□□□□ -1.63
SPG11-221ENST00000560299 ATP6V1G1O75348 118 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms