RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SAT2Q96F10 170 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-213ENST00000560175 MFFQ9GZY8 342 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 SLC39A9Q9NUM3 307 aa9.53□□□□□ -0.88
SMAD3-213ENST00000560175 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 SMIM9A6NGZ8 99 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 DEFB4AO15263 64 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 COX7A2P2O60397 106 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 MPC2O95563 127 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 PTTG1O95997 202 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 KMT2AQ03164 3969 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 BAXQ07812 192 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 PSG3Q16557 428 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 IGFL4Q6B9Z1 124 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 OR4B1Q8NGF8 309 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 OR5C1Q8NGR4 320 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 PFDN5Q99471 154 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 SLC35B3Q9H1N7 401 aa9.52□□□□□ -0.89
SMAD3-213ENST00000560175 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-213ENST00000560175 UBE2L5PA0A1B0GUS4 154 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 DUSP14O95147 198 aaKnown RBP9.51□□□□□ -0.89
SMAD3-213ENST00000560175 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
SMAD3-213ENST00000560175 B2MP61769 119 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 C1orf158Q8N1D5 194 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 NPCDR1Q9BY65 106 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 KLK5Q9Y337 293 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-213ENST00000560175 PXMP4Q9Y6I8 212 aa9.51□□□□□ -0.89
SMAD3-213ENST00000560175 H3BQ15 152 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
SMAD3-213ENST00000560175 SSNA1O43805 119 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 JTBO76095 146 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 FGF7P21781 194 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 HLA-DMBP28068 263 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 CNN1P51911 297 aaKnown RBP9.5□□□□□ -0.89
SMAD3-213ENST00000560175 FGL1Q08830 312 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 LRRC37A5PQ49AS3 106 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 OR11H7Q8NGC8 314 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
SMAD3-213ENST00000560175 TRAV5A0A0B4J249 113 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 ZNF253O75346 499 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 AMBPP02760 352 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 FXYD7P58549 80 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 GUK1Q16774 197 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 WDR61Q9GZS3 305 aaKnown RBP9.49□□□□□ -0.89
SMAD3-213ENST00000560175 TMEM14CQ9P0S9 112 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 ALG5Q9Y673 324 aa9.49□□□□□ -0.89
SMAD3-213ENST00000560175 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 SLC17A3O00476 420 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 PET100P0DJ07 73 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 TCTAP57738 103 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 ZNF738Q8NE65 137 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 LINC00476Q8WZB0 136 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 ZNF586Q9NXT0 402 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 HSPB11Q9Y547 144 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
SMAD3-213ENST00000560175 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 RPL12P30050 165 aaKnown RBP9.47□□□□□ -0.89
SMAD3-213ENST00000560175 C12orf74Q32Q52 190 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
SMAD3-213ENST00000560175 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-213ENST00000560175 CELA1Q9UNI1 258 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 RFNGQ9Y644 331 aa9.47□□□□□ -0.89
SMAD3-213ENST00000560175 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
SMAD3-213ENST00000560175 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
SMAD3-213ENST00000560175 PDE6HQ13956 83 aa9.46□□□□□ -0.9
SMAD3-213ENST00000560175 CLINT1Q14677 625 aa9.46□□□□□ -0.9
SMAD3-213ENST00000560175 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.9
SMAD3-213ENST00000560175 THAP6Q8TBB0 222 aa9.46□□□□□ -0.9
SMAD3-213ENST00000560175 ATP5SQ99766 215 aa9.46□□□□□ -0.9
SMAD3-213ENST00000560175 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 M0R2Z0 102 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 NDUFB4O95168 129 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 SNRPCP09234 159 aaKnown RBP9.45□□□□□ -0.9
SMAD3-213ENST00000560175 SPINK13Q1W4C9 94 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 Q6ZTC4 211 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 C2CD4CQ8TF44 421 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
SMAD3-213ENST00000560175 KCNIP2Q9NS61 270 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 MBD2Q9UBB5 411 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 DKK2Q9UBU2 259 aa9.45□□□□□ -0.9
SMAD3-213ENST00000560175 TSPOP30536 169 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
SMAD3-213ENST00000560175 OXA1LQ15070 435 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 FCN2Q15485 313 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 LGALS9CQ6DKI2 356 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 ASB13Q8WXK3 278 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 SLC25A2Q9BXI2 301 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
SMAD3-213ENST00000560175 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
SMAD3-213ENST00000560175 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms