RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 MIR17HGQ75NE6 70 aa12.33□□□□□ -0.44
RPL28-209ENST00000560055 RNF182Q8N6D2 247 aa12.33□□□□□ -0.44
RPL28-209ENST00000560055 OR11H4Q8NGC9 324 aa12.33□□□□□ -0.44
RPL28-209ENST00000560055 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
RPL28-209ENST00000560055 SLC25A2Q9BXI2 301 aa12.33□□□□□ -0.44
RPL28-209ENST00000560055 ZNF331Q9NQX6 463 aaPredicted RBP12.33□□□□□ -0.44
RPL28-209ENST00000560055 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
RPL28-209ENST00000560055 HMSDA8MTL9 139 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 SLC17A3O00476 420 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 SNRPCP09234 159 aaKnown RBP12.32□□□□□ -0.44
RPL28-209ENST00000560055 SPP1P10451 314 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 GUK1Q16774 197 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 DEFB135Q30KP9 77 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
RPL28-209ENST00000560055 OR2G3Q8NGZ4 309 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 RNF183Q96D59 192 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 ST6GAL2Q96JF0 529 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 WWC2-AS2Q96NR7 200 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
RPL28-209ENST00000560055 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 FUT9Q9Y231 359 aa12.32□□□□□ -0.44
RPL28-209ENST00000560055 A0A0J9YX75 114 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 F6UB75 175 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 CA1P00915 261 aaPredicted RBP12.31□□□□□ -0.44
RPL28-209ENST00000560055 C4BPBP20851 252 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 ATP6V0CP27449 155 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 RPL7L1Q6DKI1 246 aaKnown RBP12.31□□□□□ -0.44
RPL28-209ENST00000560055 HSD17B11Q8NBQ5 300 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 MFFQ9GZY8 342 aa12.31□□□□□ -0.44
RPL28-209ENST00000560055 A8MTW9 85 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 H3BTX0 84 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 SPRY2O43597 315 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 ZNF253O75346 499 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 PYYP10082 97 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
RPL28-209ENST00000560055 M6PRP20645 277 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 ZNF345Q14585 488 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 PSG3Q16557 428 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 LRRC20Q8TCA0 184 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
RPL28-209ENST00000560055 CSMD3Q7Z407 3707 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 TAAR5O14804 337 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 RHOBP62745 196 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 PDE6HQ13956 83 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 ACOT6Q3I5F7 207 aaPredicted RBP12.29□□□□□ -0.44
RPL28-209ENST00000560055 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 TCTE3Q8IZS6 198 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 KCNRGQ8N5I3 272 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 ZNF503Q96F45 646 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 STARD9Q9P2P6 4700 aa12.29□□□□□ -0.44
RPL28-209ENST00000560055 BORCS7-ASMTA0A0B4J1R7 106 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 JTBO76095 146 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 NDUFB4O95168 129 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 RAB2AP61019 212 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 SERF2P84101 59 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 CSNK1G2-AS1Q8NCQ2 148 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 FXYD5Q96DB9 178 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 CLEC5AQ9NY25 188 aa12.28□□□□□ -0.44
RPL28-209ENST00000560055 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
RPL28-209ENST00000560055 AMTNQ6UX39 209 aa12.27□□□□□ -0.45
RPL28-209ENST00000560055 RPUSD4Q96CM3 377 aaKnown RBP12.27□□□□□ -0.45
RPL28-209ENST00000560055 GNPNAT1Q96EK6 184 aaPredicted RBP12.27□□□□□ -0.45
RPL28-209ENST00000560055 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
RPL28-209ENST00000560055 OR51M1Q9H341 326 aa12.27□□□□□ -0.45
RPL28-209ENST00000560055 IGKV3-20P01619 116 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 CNN1P51911 297 aaKnown RBP12.26□□□□□ -0.45
RPL28-209ENST00000560055 TAS2R45P59539 299 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 KHDC3LQ587J8 217 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 RPP25LQ8N5L8 163 aaKnown RBP12.26□□□□□ -0.45
RPL28-209ENST00000560055 OR4B1Q8NGF8 309 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 OR8A1Q8NGG7 326 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 OR10G4Q8NGN3 311 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 OR10G9Q8NGN4 311 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 OR10G7Q8NGN6 311 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 RNF141Q8WVD5 230 aa12.26□□□□□ -0.45
RPL28-209ENST00000560055 A0A0D9SG52 128 aa12.25□□□□□ -0.45
RPL28-209ENST00000560055 ZNF705FA8MVS1 300 aaPredicted RBP12.25□□□□□ -0.45
RPL28-209ENST00000560055 OR7C2O60412 319 aa12.25□□□□□ -0.45
RPL28-209ENST00000560055 EIF3GO75821 320 aaKnown RBP eCLIP12.25□□□□□ -0.455e-18■□□□□ 10.2
RPL28-209ENST00000560055 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
RPL28-209ENST00000560055 OR10J4P0C629 311 aa12.25□□□□□ -0.45
RPL28-209ENST00000560055 NBEAP1P0C6P0 100 aa12.25□□□□□ -0.45
RPL28-209ENST00000560055 PSG9Q00887 426 aa12.25□□□□□ -0.45
RPL28-209ENST00000560055 MRPL53Q96EL3 112 aaKnown RBP12.25□□□□□ -0.45
RPL28-209ENST00000560055 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
RPL28-209ENST00000560055 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
RPL28-209ENST00000560055 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
RPL28-209ENST00000560055 MBP02144 154 aa12.24□□□□□ -0.45
RPL28-209ENST00000560055 ZNF705DP0CH99 300 aaPredicted RBP12.24□□□□□ -0.45
RPL28-209ENST00000560055 ZNF705BP0CI00 300 aaPredicted RBP12.24□□□□□ -0.45
RPL28-209ENST00000560055 FAM122CQ6P4D5 195 aa12.24□□□□□ -0.45
RPL28-209ENST00000560055 BLNKQ8WV28 456 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms