RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ZP3P21754 424 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 MYCNOSP40205 109 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 TFPI2P48307 235 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 DEFB1P60022 68 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 PLP1P60201 277 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 UBE2G2P60604 165 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 EIF5AP63241 154 aaKnown RBP3.93□□□□□ -1.78
SPG11-220ENST00000559933 UBE2L3P68036 154 aaKnown RBP3.93□□□□□ -1.78
SPG11-220ENST00000559933 FAM106AQ4KMX7 169 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 GPHB5Q86YW7 130 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 GBGT1Q8N5D6 347 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 FAM24BQ8N5W8 94 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 OR9G4Q8NGQ1 327 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 OR1L4Q8NGR5 311 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 SFT2D1Q8WV19 159 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 BLNKQ8WV28 456 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 PHYHIPLQ96FC7 376 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 METTL26Q96S19 204 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 ATP6V0BQ99437 205 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 SHANK2-AS3Q9BTD1 123 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 RHPN1-AS1Q9BWJ2 59 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 MAP1LC3BQ9GZQ8 125 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 HRH4Q9H3N8 390 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 DNAJC4Q9NNZ3 241 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 DAZ1Q9NQZ3 744 aaKnown RBP3.93□□□□□ -1.78
SPG11-220ENST00000559933 KCNIP2Q9NS61 270 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 GAR1Q9NY12 217 aaKnown RBP3.93□□□□□ -1.78
SPG11-220ENST00000559933 CTXND1A0A1B0GTU2 59 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 A0A1W2PPV4 95 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 B5MCH6 92 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 BUB3O43684 328 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 IFNA7P01567 189 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 STAG3L2P0CL84 134 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 STAG3L3P0CL85 134 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 C8orf88P0DMB2 117 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 FOLR2P14207 255 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 IGLL1P15814 213 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 CBLN1P23435 193 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 NPPCP23582 126 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 CRYBB3P26998 211 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 GCHFRP30047 84 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 RHOBP62745 196 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 SERF2P84101 59 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 CD300EQ496F6 205 aaPredicted RBP3.92□□□□□ -1.78
SPG11-220ENST00000559933 C16orf54Q6UWD8 224 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 RNF182Q8N6D2 247 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 GLMPQ8WWB7 406 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 FXYD5Q96DB9 178 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 PFDN5Q99471 154 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 ASCL2Q99929 193 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 PAXXQ9BUH6 204 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 MRPL32Q9BYC8 188 aaKnown RBP3.92□□□□□ -1.78
SPG11-220ENST00000559933 ACTR3CQ9C0K3 210 aaPredicted RBP3.92□□□□□ -1.78
SPG11-220ENST00000559933 TMEM231Q9H6L2 316 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 ZNF586Q9NXT0 402 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 SMPXQ9UHP9 88 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 RPH3ALQ9UNE2 315 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 UFC1Q9Y3C8 167 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 YTHDF2Q9Y5A9 579 aaKnown RBP3.92□□□□□ -1.78
SPG11-220ENST00000559933 PKD1L1Q8TDX9 2849 aa3.92□□□□□ -1.78
SPG11-220ENST00000559933 NBEAL2Q6ZNJ1 2754 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 GAGE12BA1L429 117 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 GAGE12HA6NDE8 117 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 GGTLC3B5MD39 225 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 UMAD1C9J7I0 102 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 DIRC3C9JPN6 131 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 LGALS9O00182 355 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 NDUFB4O95168 129 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 MBP02144 154 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 IGLC2P0DOY2 106 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 ATP5G3P48201 142 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 GNG5P63218 68 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 HAGHQ16775 308 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 KHDC3LQ587J8 217 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 EIF5AL1Q6IS14 154 aaKnown RBP3.91□□□□□ -1.78
SPG11-220ENST00000559933 SIGLEC15Q6ZMC9 328 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 ZNF767PQ75MW2 155 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 TCF24Q7RTU0 167 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 TMEM61Q8N0U2 210 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 OR8I2Q8N0Y5 310 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 EXOC3-AS1Q8N2X6 119 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 STXBP6Q8NFX7 210 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 OR4F17Q8NGA8 305 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 DYNLRB2Q8TF09 96 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 OR4F4Q96R69 305 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 RARRES2Q99969 163 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 MLST8Q9BVC4 326 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 WFDC10AQ9H1F0 79 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 OR51M1Q9H341 326 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 TECRQ9NZ01 308 aaKnown RBP3.91□□□□□ -1.78
SPG11-220ENST00000559933 GNG13Q9P2W3 67 aa3.91□□□□□ -1.78
SPG11-220ENST00000559933 TRBV19A0A075B6N1 114 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 TRAV8-2A0A0B4J237 113 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 ZNF785A8K8V0 405 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 ZNF705FA8MVS1 300 aaPredicted RBP3.9□□□□□ -1.79
SPG11-220ENST00000559933 C9JQL5 133 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 PRAC2D3DTV9 90 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms