RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 IGKV1D-37A0A075B6S9 117 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 DIRC3C9JPN6 131 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 SMLR1H3BR10 107 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 METTL15P1P0C7V9 234 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 GATA2P23769 480 aaPredicted RBP7.15□□□□□ -1.27
SPG11-214ENST00000558989 CRYBB3P26998 211 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 GPX4P36969 197 aaPredicted RBP7.15□□□□□ -1.27
SPG11-214ENST00000558989 DEFB131AP59861 70 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 LINC00299Q6ZSB3 139 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 ACOT7LQ6ZUV0 252 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 ZNF546Q86UE3 836 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 C12orf45Q8N5I9 185 aaPredicted RBP7.15□□□□□ -1.27
SPG11-214ENST00000558989 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.27
SPG11-214ENST00000558989 MAP1LC3CQ9BXW4 147 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 MAP6D1Q9H9H5 199 aa7.15□□□□□ -1.27
SPG11-214ENST00000558989 ZNF688P0C7X2 276 aa7.14□□□□□ -1.27
SPG11-214ENST00000558989 S100A10P60903 97 aa7.14□□□□□ -1.27
SPG11-214ENST00000558989 ASAH1Q13510 395 aa7.14□□□□□ -1.27
SPG11-214ENST00000558989 DEFB135Q30KP9 77 aa7.14□□□□□ -1.27
SPG11-214ENST00000558989 IGKV1OR2-108A0A075B7D4 117 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 SNAI2O43623 268 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 DOK5Q9P104 306 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 E5RGE8 158 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 SIX6O95475 246 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 PAX9P55771 341 aa7.13□□□□□ -1.27
SPG11-214ENST00000558989 KNCNA6PVL3 124 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 SNRPGP15A8MWD9 76 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 ORM2P19652 201 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 PMCHP20382 165 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 ID1P41134 155 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 INO80EQ8NBZ0 244 aaPredicted RBP7.12□□□□□ -1.27
SPG11-214ENST00000558989 MUC7Q8TAX7 377 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 SMIM8Q96KF7 97 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 SLC25A22Q9H936 323 aa7.12□□□□□ -1.27
SPG11-214ENST00000558989 C7orf66A4D0T2 115 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 K7EQG2 157 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 GOSR2O14653 212 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 EIF2B2P49770 351 aaKnown RBP7.11□□□□□ -1.27
SPG11-214ENST00000558989 CAV2P51636 162 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 APOC4P55056 127 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 PSMG4Q5JS54 123 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 OR1B1Q8NGR6 318 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 TRGV9Q99603 122 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 OVOL2Q9BRP0 275 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 EDA2RQ9HAV5 297 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 FAM24AA6NFZ4 105 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 INMT-MINDY4F8WBC2 141 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 K7EPK0 472 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 BUB3O43684 328 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 GATCO43716 136 aaKnown RBP7.11□□□□□ -1.27
SPG11-214ENST00000558989 CD5P06127 495 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 FABP1P07148 127 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 DEFB1P60022 68 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 ARL16Q0P5N6 197 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 ACTL10Q5JWF8 245 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 OR10P1Q8NGE3 313 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 C2orf50Q96LR7 162 aa7.11□□□□□ -1.27
SPG11-214ENST00000558989 CST7O76096 145 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 IL5P05113 134 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 EWSR1Q01844 656 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPG11-214ENST00000558989 SLC38A11Q08AI6 406 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 LRRC37A5PQ49AS3 106 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 TMEM14EPQ6UXP3 125 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 OR8I2Q8N0Y5 310 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 LINC00052Q96N35 136 aa7.1□□□□□ -1.27
SPG11-214ENST00000558989 CA1P00915 261 aaPredicted RBP7.09□□□□□ -1.27
SPG11-214ENST00000558989 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
SPG11-214ENST00000558989 AP2S1P53680 142 aaPredicted RBP7.09□□□□□ -1.27
SPG11-214ENST00000558989 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
SPG11-214ENST00000558989 DEFA1P59665 94 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 DEFA3P59666 94 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 ZNF415Q09FC8 603 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 CASC10Q5T4H9 136 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 CYP2G1PQ6ZSU1 146 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 TMEM144Q7Z5S9 345 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
SPG11-214ENST00000558989 CSTL1Q9H114 145 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 NRN1Q9NPD7 142 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
SPG11-214ENST00000558989 A0A0J9YWU9 116 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 C3orf84H3BNL1 204 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 IGKV3-20P01619 116 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 OR5G3P0C626 314 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 RAB4AP20338 218 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 BOD1L2Q8IYS8 172 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 UHRF2Q96PU4 802 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 TMEM147Q9BVK8 224 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 KMT2CQ8NEZ4 4911 aaKnown RBP7.08□□□□□ -1.28
SPG11-214ENST00000558989 DEFB4AO15263 64 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 SSNA1O43805 119 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 SNRPCP09234 159 aaKnown RBP7.08□□□□□ -1.28
SPG11-214ENST00000558989 NPSP0C0P6 89 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 LINC00869P0C866 280 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 PVALBP20472 110 aaPredicted RBP7.08□□□□□ -1.28
SPG11-214ENST00000558989 IGFL4Q6B9Z1 124 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 SCRT1Q9BWW7 348 aa7.08□□□□□ -1.28
SPG11-214ENST00000558989 NPVFQ9HCQ7 196 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms