RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
RABGGTA-208ENST00000558954 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
RABGGTA-208ENST00000558954 PSMG3Q9BT73 122 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-208ENST00000558954 MFFQ9GZY8 342 aa13.86□□□□□ -0.19
RABGGTA-208ENST00000558954 FUT9Q9Y231 359 aa13.86□□□□□ -0.19
RABGGTA-208ENST00000558954 NUTF2P61970 127 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 RHOBP62745 196 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 ZNF345Q14585 488 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 ACOT6Q3I5F7 207 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 GDF5OSQ5U4N7 250 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 MIR17HGQ75NE6 70 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 ZNF738Q8NE65 137 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 WWC2-AS2Q96NR7 200 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 OVOL2Q9BRP0 275 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 SLC25A2Q9BXI2 301 aa13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 ZNF331Q9NQX6 463 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-208ENST00000558954 A0A0J9YX75 114 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 H3BQ15 152 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 SLC17A3O00476 420 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 TAAR5O14804 337 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 SPRY2O43597 315 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 ZNF253O75346 499 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 DEFB1P60022 68 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 IGFL4Q6B9Z1 124 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 OR2G3Q8NGZ4 309 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 RNF183Q96D59 192 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 CLUHP3Q96NS8 147 aa13.84□□□□□ -0.19
RABGGTA-208ENST00000558954 HMSDA8MTL9 139 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 F6UB75 175 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 H3BTX0 84 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 PYYP10082 97 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 HIST1H1EP10412 219 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 M6PRP20645 277 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 C4BPBP20851 252 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 ATP6V0CP27449 155 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 TAS2R45P59539 299 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 PDE6HQ13956 83 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 PSG3Q16557 428 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 KHDC3LQ587J8 217 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 RPL7L1Q6DKI1 246 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 GNPNAT1Q96EK6 184 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 ZNF586Q9NXT0 402 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 CLEC5AQ9NY25 188 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
RABGGTA-208ENST00000558954 TRBV19A0A075B6N1 114 aa13.82□□□□□ -0.2
RABGGTA-208ENST00000558954 OR7C2O60412 319 aa13.82□□□□□ -0.2
RABGGTA-208ENST00000558954 JTBO76095 146 aa13.82□□□□□ -0.2
RABGGTA-208ENST00000558954 SERF2P84101 59 aa13.82□□□□□ -0.2
RABGGTA-208ENST00000558954 OR4B1Q8NGF8 309 aa13.82□□□□□ -0.2
RABGGTA-208ENST00000558954 SAT2Q96F10 170 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-208ENST00000558954 HLA-DMBP28068 263 aa13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 RAB2AP61019 212 aa13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 OR11H4Q8NGC9 324 aa13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 RPUSD4Q96CM3 377 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 ST6GAL2Q96JF0 529 aa13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 PAXXQ9BUH6 204 aa13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 OR51M1Q9H341 326 aa13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 HUWE1Q7Z6Z7 4374 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-208ENST00000558954 hCG_2014768A0A024R1R8 64 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 A0A1W2PPV4 95 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 DUSP14O95147 198 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 MBP02144 154 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 GIG44P09565 113 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 PSG9Q00887 426 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 TCTE3Q8IZS6 198 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 KCNRGQ8N5I3 272 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 OR10G4Q8NGN3 311 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 OR10G9Q8NGN4 311 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 OR10G7Q8NGN6 311 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 ARPC5LQ9BPX5 153 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 SH3BGRL3Q9H299 93 aa13.8□□□□□ -0.2
RABGGTA-208ENST00000558954 A0A0D9SG52 128 aa13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 A8MTW9 85 aa13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 OR10J4P0C629 311 aa13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 CNN1P51911 297 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 UBE2L3P68036 154 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 FAM122CQ6P4D5 195 aa13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 FXYD5Q96DB9 178 aa13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 EDA2RQ9HAV5 297 aa13.79□□□□□ -0.2
RABGGTA-208ENST00000558954 NBEAP1P0C6P0 100 aa13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 CDC34P49427 236 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 HIST1H1AQ02539 215 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 PQLC2Q6ZP29 291 aa13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 RNF141Q8WVD5 230 aa13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 MRPL53Q96EL3 112 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 AAMDCQ9H7C9 122 aa13.78□□□□□ -0.2
RABGGTA-208ENST00000558954 NDUFB4O95168 129 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 AKAP14Q86UN6 197 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 RARRES2Q99969 163 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 SLC35B3Q9H1N7 401 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 XCL2Q9UBD3 114 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 PRELID1Q9Y255 219 aa13.77□□□□□ -0.21
RABGGTA-208ENST00000558954 KANTRA0A1W2PQU2 76 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms