RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
CSHL1-208ENST00000558609 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
CSHL1-208ENST00000558609 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
CSHL1-208ENST00000558609 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
CSHL1-208ENST00000558609 RFNGQ9Y644 331 aa11.12□□□□□ -0.63
CSHL1-208ENST00000558609 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 AMBPP02760 352 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 CXCL3P19876 107 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
CSHL1-208ENST00000558609 RAB31Q13636 194 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 RAB32Q13637 225 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
CSHL1-208ENST00000558609 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 S100A11P31949 105 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 CAMLGP49069 296 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 SULT1A1P50225 295 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 S100A10P60903 97 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 RPP25LQ8N5L8 163 aaKnown RBP11.1□□□□□ -0.63
CSHL1-208ENST00000558609 TMEM252Q8N6L7 170 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 UQCC1Q9NVA1 299 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 WDR83OSQ9Y284 106 aa11.1□□□□□ -0.63
CSHL1-208ENST00000558609 DNAH10Q8IVF4 4471 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 DEFB131BA0A096LNP1 70 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 IGSF23A1L1A6 192 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 COX7A2P2O60397 106 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 HBE1P02100 147 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 CXCL2P19875 107 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 EMP1P54849 157 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 PRR20EP86478 221 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 PRR20CP86479 221 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 PRR20DP86480 221 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 PRR20BP86481 221 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 PRR20AP86496 221 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 PSG3Q16557 428 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 ZNF767PQ75MW2 155 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 BPIFA4PQ86YQ2 179 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 LRRC20Q8TCA0 184 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 DNAJC4Q9NNZ3 241 aa11.09□□□□□ -0.63
CSHL1-208ENST00000558609 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 TEX48A0A1B0GUV7 120 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 CRXO43186 299 aaPredicted RBP11.08□□□□□ -0.64
CSHL1-208ENST00000558609 SIX6O95475 246 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 HBG1P69891 147 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 HBG2P69892 147 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 C10orf113Q5VZT2 155 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 Q6ZRG5 221 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 STX12Q86Y82 276 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
CSHL1-208ENST00000558609 DKK2Q9UBU2 259 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
CSHL1-208ENST00000558609 LOC102723971A0A1B0GUV8 181 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 M0R2Z0 102 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 RPL29P47914 159 aaKnown RBP11.07□□□□□ -0.64
CSHL1-208ENST00000558609 OPCMLQ14982 345 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 ATP6V1FQ16864 119 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 ZFP69Q49AA0 526 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 MIC13Q5XKP0 118 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 ST6GAL2Q96JF0 529 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 SLC50A1Q9BRV3 221 aa11.07□□□□□ -0.64
CSHL1-208ENST00000558609 RYR1P21817 5038 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 BOLA2-SMG1P6H3BVE0 249 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 INSP01308 110 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 GIPP09681 153 aaPredicted RBP11.06□□□□□ -0.64
CSHL1-208ENST00000558609 IGLC2P0DOY2 106 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 B2MP61769 119 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 CYCSP99999 105 aaKnown RBP11.06□□□□□ -0.64
CSHL1-208ENST00000558609 HIST1H1AQ02539 215 aaPredicted RBP11.06□□□□□ -0.64
CSHL1-208ENST00000558609 CD300CQ08708 224 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 FAM222AQ5U5X8 452 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 OR1L4Q8NGR5 311 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
CSHL1-208ENST00000558609 PFDN5Q99471 154 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 TMEM208Q9BTX3 173 aa11.06□□□□□ -0.64
CSHL1-208ENST00000558609 VPS13DQ5THJ4 4388 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 UBE2L5PA0A1B0GUS4 154 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 RHOBP62745 196 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 BAXQ07812 192 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 TCTE3Q8IZS6 198 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 ASB13Q8WXK3 278 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 SAT2Q96F10 170 aaPredicted RBP11.05□□□□□ -0.64
CSHL1-208ENST00000558609 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 NMES1Q9C002 83 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 SLC39A9Q9NUM3 307 aa11.05□□□□□ -0.64
CSHL1-208ENST00000558609 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
CSHL1-208ENST00000558609 H3BQ15 152 aa11.04□□□□□ -0.64
CSHL1-208ENST00000558609 MPDU1O75352 247 aa11.04□□□□□ -0.64
CSHL1-208ENST00000558609 RLN2P04090 185 aa11.04□□□□□ -0.64
CSHL1-208ENST00000558609 SNRPCP09234 159 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms