RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 DEFB1P60022 68 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 SPATA31B1PQ5VZV4 182 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 EBLN2Q6P2I7 272 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 Q6ZNX1 250 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 RNF182Q8N6D2 247 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 RNF183Q96D59 192 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 SLC50A1Q9BRV3 221 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 HRH4Q9H3N8 390 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 TMEM14CQ9P0S9 112 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 TIMM9Q9Y5J7 89 aa9.97□□□□□ -0.81
SHMT2-228ENST00000557302 AGRNO00468 2067 aa9.96□□□□□ -0.81
SHMT2-228ENST00000557302 H3BTX0 84 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 ARPC5O15511 151 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 NUTF2P61970 127 aaKnown RBP9.96□□□□□ -0.82
SHMT2-228ENST00000557302 GUK1Q16774 197 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 TMEM41BQ5BJD5 291 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 GDF5OSQ5U4N7 250 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 MIR17HGQ75NE6 70 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF738Q8NE65 137 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
SHMT2-228ENST00000557302 BORCS7-ASMTA0A0B4J1R7 106 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 A0A0J9YX75 114 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 F6UB75 175 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 H3BQ15 152 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 PSG3Q16557 428 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 ACOT6Q3I5F7 207 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-228ENST00000557302 OR4B1Q8NGF8 309 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 MFFQ9GZY8 342 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF331Q9NQX6 463 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-228ENST00000557302 RFNGQ9Y644 331 aa9.95□□□□□ -0.82
SHMT2-228ENST00000557302 SLC17A3O00476 420 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 IGKV3-20P01619 116 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-228ENST00000557302 PYYP10082 97 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 HIST1H1EP10412 219 aaKnown RBP9.94□□□□□ -0.82
SHMT2-228ENST00000557302 M6PRP20645 277 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 C4BPBP20851 252 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 HLA-DMBP28068 263 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 RHOBP62745 196 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 SAT2Q96F10 170 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-228ENST00000557302 FAM167A-AS1Q96KT0 104 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 CLUHP3Q96NS8 147 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 PSMG3Q9BT73 122 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF586Q9NXT0 402 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 CLEC5AQ9NY25 188 aa9.94□□□□□ -0.82
SHMT2-228ENST00000557302 TRBV19A0A075B6N1 114 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 TAAR5O14804 337 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF253O75346 499 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 DUSP14O95147 198 aaKnown RBP9.93□□□□□ -0.82
SHMT2-228ENST00000557302 ATP6V0CP27449 155 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 RPL7L1Q6DKI1 246 aaKnown RBP9.93□□□□□ -0.82
SHMT2-228ENST00000557302 OR2G3Q8NGZ4 309 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 PAXXQ9BUH6 204 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 C1QTNF4Q9BXJ3 329 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 OR51M1Q9H341 326 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 EDA2RQ9HAV5 297 aa9.93□□□□□ -0.82
SHMT2-228ENST00000557302 A0A1W2PPV4 95 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 HMSDA8MTL9 139 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 OR7C2O60412 319 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
SHMT2-228ENST00000557302 TAS2R45P59539 299 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 RAB2AP61019 212 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 PSG9Q00887 426 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 PDE6HQ13956 83 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF345Q14585 488 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 KHDC3LQ587J8 217 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 BLNKQ8WV28 456 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 RPUSD4Q96CM3 377 aaKnown RBP9.92□□□□□ -0.82
SHMT2-228ENST00000557302 GNPNAT1Q96EK6 184 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-228ENST00000557302 RARRES2Q99969 163 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 RYR3Q15413 4870 aa9.92□□□□□ -0.82
SHMT2-228ENST00000557302 JTBO76095 146 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 MBP02144 154 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF705DP0CH99 300 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF705BP0CI00 300 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-228ENST00000557302 FXYD7P58549 80 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 SERF2P84101 59 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 HIST1H1AQ02539 215 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-228ENST00000557302 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 KCNRGQ8N5I3 272 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 OR11H4Q8NGC9 324 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 OR8A1Q8NGG7 326 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 RNF141Q8WVD5 230 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 FXYD5Q96DB9 178 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 ST6GAL2Q96JF0 529 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 SH3BGRL3Q9H299 93 aa9.91□□□□□ -0.82
SHMT2-228ENST00000557302 A8MTW9 85 aa9.9□□□□□ -0.82
SHMT2-228ENST00000557302 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-228ENST00000557302 NDUFB4O95168 129 aa9.9□□□□□ -0.82
SHMT2-228ENST00000557302 OR10J4P0C629 311 aa9.9□□□□□ -0.82
SHMT2-228ENST00000557302 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
SHMT2-228ENST00000557302 UBE2L3P68036 154 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms