RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.29
NEDD1-209ENST00000557092 AMBPP02760 352 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 SNRPCP09234 159 aaKnown RBP13.21□□□□□ -0.29
NEDD1-209ENST00000557092 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 CXCL3P19876 107 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 S100A11P31949 105 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 HBG1P69891 147 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 HBG2P69892 147 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 HIST1H1AQ02539 215 aaPredicted RBP13.21□□□□□ -0.29
NEDD1-209ENST00000557092 BAXQ07812 192 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 IL15RAQ13261 267 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 SPINK13Q1W4C9 94 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 TMEM252Q8N6L7 170 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 TMEM37Q8WXS4 190 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 IGF2BP2-AS1Q96M15 143 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 APLNQ9ULZ1 77 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 WDR83OSQ9Y284 106 aa13.21□□□□□ -0.29
NEDD1-209ENST00000557092 IGHV4-4A0A075B6R2 117 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 DEFB131BA0A096LNP1 70 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 M0R2Z0 102 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 SIX6O95475 246 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 RHOBP62745 196 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 IFITM3Q01628 133 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 PSG3Q16557 428 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 RRN3P1Q2M238 152 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 LCN15Q6UWW0 184 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 RPP25LQ8N5L8 163 aaKnown RBP13.2□□□□□ -0.3
NEDD1-209ENST00000557092 PPP1R14DQ9NXH3 145 aa13.2□□□□□ -0.3
NEDD1-209ENST00000557092 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 INMT-MINDY4F8WBC2 141 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 PRAF2O60831 178 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 INSP01308 110 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 PRB4P10163 310 aaPredicted RBP13.19□□□□□ -0.3
NEDD1-209ENST00000557092 CXCL2P19875 107 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 OPCMLQ14982 345 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 VWC2Q2TAL6 325 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 OR8A1Q8NGG7 326 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
NEDD1-209ENST00000557092 TEX48A0A1B0GUV7 120 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 H3BTX0 84 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 FGF7P21781 194 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 PRR20EP86478 221 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 PRR20CP86479 221 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 PRR20DP86480 221 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 PRR20BP86481 221 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 PRR20AP86496 221 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
NEDD1-209ENST00000557092 PFDN5Q99471 154 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 RNF126Q9BV68 326 aa13.18□□□□□ -0.3
NEDD1-209ENST00000557092 ZNF331Q9NQX6 463 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-209ENST00000557092 RLN2P04090 185 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 DEFA1P59665 94 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 DEFA3P59666 94 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 B2MP61769 119 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 LRRC37A5PQ49AS3 106 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 FAM222AQ5U5X8 452 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 DKK2Q9UBU2 259 aa13.17□□□□□ -0.3
NEDD1-209ENST00000557092 YTHDF2Q9Y5A9 579 aaKnown RBP13.17□□□□□ -0.3
NEDD1-209ENST00000557092 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
NEDD1-209ENST00000557092 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-209ENST00000557092 RPL29P47914 159 aaKnown RBP13.16□□□□□ -0.3
NEDD1-209ENST00000557092 NIPSNAP3BQ9BS92 247 aa13.16□□□□□ -0.3
NEDD1-209ENST00000557092 NMES1Q9C002 83 aa13.16□□□□□ -0.3
NEDD1-209ENST00000557092 PXMP4Q9Y6I8 212 aa13.16□□□□□ -0.3
NEDD1-209ENST00000557092 TRAV5A0A0B4J249 113 aa13.15□□□□□ -0.3
NEDD1-209ENST00000557092 E5RGE8 158 aa13.15□□□□□ -0.3
NEDD1-209ENST00000557092 SLC17A3O00476 420 aa13.15□□□□□ -0.3
NEDD1-209ENST00000557092 SLC25A31Q9H0C2 315 aa13.15□□□□□ -0.3
NEDD1-209ENST00000557092 OR5AC2Q9NZP5 309 aa13.15□□□□□ -0.3
NEDD1-209ENST00000557092 KMT2AQ03164 3969 aa13.15□□□□□ -0.3
NEDD1-209ENST00000557092 ZNF705GA8MUZ8 300 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-209ENST00000557092 IGLC2P0DOY2 106 aa13.14□□□□□ -0.31
NEDD1-209ENST00000557092 CYCSP99999 105 aaKnown RBP13.14□□□□□ -0.31
NEDD1-209ENST00000557092 NHLH2Q02577 135 aa13.14□□□□□ -0.31
NEDD1-209ENST00000557092 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
NEDD1-209ENST00000557092 NDUFAF3Q9BU61 184 aa13.14□□□□□ -0.31
NEDD1-209ENST00000557092 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
NEDD1-209ENST00000557092 VPS13DQ5THJ4 4388 aa13.14□□□□□ -0.31
NEDD1-209ENST00000557092 H3BQ15 152 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 SSNA1O43805 119 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 MPDU1O75352 247 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 HTN3P15516 51 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 OR10J6PQ8NGY7 276 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 CHAC2Q8WUX2 184 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 MARVELD1Q9BSK0 173 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 BATF3Q9NR55 127 aa13.13□□□□□ -0.31
NEDD1-209ENST00000557092 BIRC6Q9NR09 4857 aa13.12□□□□□ -0.31
NEDD1-209ENST00000557092 PRM2P04554 102 aa13.12□□□□□ -0.31
NEDD1-209ENST00000557092 DAD1P61803 113 aa13.12□□□□□ -0.31
NEDD1-209ENST00000557092 CLINT1Q14677 625 aa13.12□□□□□ -0.31
NEDD1-209ENST00000557092 GUK1Q16774 197 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms