RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CCL18P55774 89 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 ATP5IP56385 69 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-223ENST00000556689 RAB11AP62491 216 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 RAB32Q13637 225 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 SLC25A31Q9H0C2 315 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 RBKSQ9H477 322 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 PAIP2BQ9ULR5 123 aaKnown RBP8.9□□□□□ -0.98
SHMT2-223ENST00000556689 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.98
SHMT2-223ENST00000556689 STRAPQ9Y3F4 350 aaKnown RBP8.9□□□□□ -0.98
SHMT2-223ENST00000556689 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 A0A0J9YX75 114 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 LYRM9A8MSI8 78 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 ISLRO14498 428 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 TSC22D2O75157 780 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 MPC2O95563 127 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 NUDT3O95989 172 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 TAS2R30P59541 319 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 POLR2GP62487 172 aaKnown RBP eCLIP8.89□□□□□ -0.99
SHMT2-223ENST00000556689 HBG1P69891 147 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 HBG2P69892 147 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 ID3Q02535 119 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 IGF2BP2-AS1Q96M15 143 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 RPRMQ9NS64 109 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 PSENENQ9NZ42 101 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 MBD2Q9UBB5 411 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 U3KQ87 197 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 HERC1Q15751 4861 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 NACAE9PAV3 2078 aa8.89□□□□□ -0.99
SHMT2-223ENST00000556689 ZFP92A6NM28 416 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 F5H768 121 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 IAPPP10997 89 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 ZNF90Q03938 601 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 SAMD13Q5VXD3 122 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 SPATA12Q7Z6I5 190 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 OR8I2Q8N0Y5 310 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 DOK5Q9P104 306 aa8.88□□□□□ -0.99
SHMT2-223ENST00000556689 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-223ENST00000556689 C1QBP02746 253 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 PRM2P04554 102 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 FABP1P07148 127 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 GPX4P36969 197 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-223ENST00000556689 LYZP61626 148 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 B2MP61769 119 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 BAXQ07812 192 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 SPANXN5Q5MJ07 72 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 SMIM8Q96KF7 97 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 C16orf92Q96LL3 132 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 HYLS1Q96M11 299 aa8.87□□□□□ -0.99
SHMT2-223ENST00000556689 LYRM2Q9NU23 88 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-223ENST00000556689 A8MTW9 85 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 H3BP45 60 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 MEOX2P50222 304 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 GAMTQ14353 236 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 AMTNQ6UX39 209 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 ZNF546Q86UE3 836 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 ST6GAL2Q96JF0 529 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 C20orf173Q96LM9 149 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 Q9H8V8 135 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 LINC00588Q9Y4M8 146 aa8.86□□□□□ -0.99
SHMT2-223ENST00000556689 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 CBY3A6NI87 242 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 ARPC5O15511 151 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 ATP5G1P05496 136 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 TSPOP30536 169 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 ATP5G3P48201 142 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 CLINT1Q14677 625 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 OR10P1Q8NGE3 313 aa8.85□□□□□ -0.99
SHMT2-223ENST00000556689 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-223ENST00000556689 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
SHMT2-223ENST00000556689 INSP01308 110 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 AZU1P20160 251 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 RPL12P30050 165 aaKnown RBP8.84□□□□□ -0.99
SHMT2-223ENST00000556689 GALR1P47211 349 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 SULT1A1P50225 295 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 IL15RAQ13261 267 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 OR2F1Q13607 317 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 ZNF345Q14585 488 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 SPINK13Q1W4C9 94 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 OR5AC2Q9NZP5 309 aa8.84□□□□□ -0.99
SHMT2-223ENST00000556689 A0A0D9SG52 128 aa8.83□□□□□ -1
SHMT2-223ENST00000556689 HMSDA8MTL9 139 aa8.83□□□□□ -1
SHMT2-223ENST00000556689 M0R2Z0 102 aa8.83□□□□□ -1
SHMT2-223ENST00000556689 METTL15P1P0C7V9 234 aa8.83□□□□□ -1
SHMT2-223ENST00000556689 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
SHMT2-223ENST00000556689 ACOT7LQ6ZUV0 252 aa8.83□□□□□ -1
SHMT2-223ENST00000556689 RNF141Q8WVD5 230 aa8.83□□□□□ -1
SHMT2-223ENST00000556689 BORCS7-ASMTA0A0B4J1R7 106 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 EPM2AB3EWF7 344 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 SMLR1H3BR10 107 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 CFDP00746 253 aaPredicted RBP8.82□□□□□ -1
SHMT2-223ENST00000556689 S100A11P31949 105 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 KRTAP10-2P60368 255 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms