RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 PFDN5Q99471 154 aa11.81□□□□□ -0.52
TGFB3-206ENST00000556674 SCRT1Q9BWW7 348 aa11.81□□□□□ -0.52
TGFB3-206ENST00000556674 SAV1Q9H4B6 383 aaPredicted RBP11.81□□□□□ -0.52
TGFB3-206ENST00000556674 LOC105371267A0A1B0GV96 52 aa11.8□□□□□ -0.52
TGFB3-206ENST00000556674 RPL29P47914 159 aaKnown RBP11.8□□□□□ -0.52
TGFB3-206ENST00000556674 EBLN2Q6P2I7 272 aa11.8□□□□□ -0.52
TGFB3-206ENST00000556674 OR11H2Q8NH07 326 aa11.8□□□□□ -0.52
TGFB3-206ENST00000556674 A0A087X0K7 114 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 UBE2L5PA0A1B0GUS4 154 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 CXCL2P19875 107 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 PRR20EP86478 221 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 PRR20CP86479 221 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 PRR20DP86480 221 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 PRR20BP86481 221 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 PRR20AP86496 221 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 EWSR1Q01844 656 aaKnown RBP eCLIP11.79□□□□□ -0.52
TGFB3-206ENST00000556674 FGL1Q08830 312 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 PATE2Q6UY27 113 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 LINC00305Q7Z4B0 112 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 BPIFA4PQ86YQ2 179 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 UHRF2Q96PU4 802 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
TGFB3-206ENST00000556674 DNAJC4Q9NNZ3 241 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 KCNIP2Q9NS61 270 aa11.79□□□□□ -0.52
TGFB3-206ENST00000556674 B2MP61769 119 aa11.78□□□□□ -0.52
TGFB3-206ENST00000556674 ZNF345Q14585 488 aa11.78□□□□□ -0.52
TGFB3-206ENST00000556674 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
TGFB3-206ENST00000556674 OR5AC2Q9NZP5 309 aa11.78□□□□□ -0.52
TGFB3-206ENST00000556674 PLECQ15149 4684 aaKnown RBP11.77□□□□□ -0.53
TGFB3-206ENST00000556674 MIFP14174 115 aa11.77□□□□□ -0.53
TGFB3-206ENST00000556674 FGF7P21781 194 aa11.77□□□□□ -0.53
TGFB3-206ENST00000556674 NHLH2Q02577 135 aa11.77□□□□□ -0.53
TGFB3-206ENST00000556674 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
TGFB3-206ENST00000556674 SLC39A9Q9NUM3 307 aa11.77□□□□□ -0.53
TGFB3-206ENST00000556674 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
TGFB3-206ENST00000556674 A0A0D9SG52 128 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
TGFB3-206ENST00000556674 H0YIZ8 118 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
TGFB3-206ENST00000556674 NMBP08949 121 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 GIG44P09565 113 aaPredicted RBP11.76□□□□□ -0.53
TGFB3-206ENST00000556674 MIC13Q5XKP0 118 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 LCN15Q6UWW0 184 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 TMUB2Q71RG4 321 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 PHYHIPLQ96FC7 376 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 TMA7Q9Y2S6 64 aaKnown RBP11.76□□□□□ -0.53
TGFB3-206ENST00000556674 PXMP4Q9Y6I8 212 aa11.76□□□□□ -0.53
TGFB3-206ENST00000556674 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 A0A0J9YX75 114 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 GUK1Q16774 197 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 ZNF709Q8N972 641 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 CSNK1G2-AS1Q8NCQ2 148 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 OR4B1Q8NGF8 309 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 C17orf77Q96MU5 243 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
TGFB3-206ENST00000556674 C17orf112F2Z3M2 114 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 AMBPP02760 352 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 PSG9Q00887 426 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 GDF5OSQ5U4N7 250 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 THAP6Q8TBB0 222 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 ATP5SQ99766 215 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 FRAS1Q86XX4 4008 aa11.74□□□□□ -0.53
TGFB3-206ENST00000556674 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 A8MTW9 85 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 AGRNO00468 2067 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
TGFB3-206ENST00000556674 RPL12P30050 165 aaKnown RBP11.73□□□□□ -0.53
TGFB3-206ENST00000556674 CLINT1Q14677 625 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 FAM78BQ5VT40 261 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 C20orf173Q96LM9 149 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
TGFB3-206ENST00000556674 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
TGFB3-206ENST00000556674 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 CXorf65A6NEN9 183 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 SMIM9A6NGZ8 99 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 IFNA5P01569 189 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 Q8NAQ8 132 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 ZNF738Q8NE65 137 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 NEU1Q99519 415 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 ZNF331Q9NQX6 463 aaPredicted RBP11.72□□□□□ -0.53
TGFB3-206ENST00000556674 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 XCL2Q9UBD3 114 aa11.72□□□□□ -0.53
TGFB3-206ENST00000556674 ZNF253O75346 499 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 IGLC2P0DOY2 106 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 PSG3Q16557 428 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.53
TGFB3-206ENST00000556674 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
TGFB3-206ENST00000556674 F6UB75 175 aa11.7□□□□□ -0.54
TGFB3-206ENST00000556674 ARPC5O15511 151 aa11.7□□□□□ -0.54
TGFB3-206ENST00000556674 UQCC3Q6UW78 93 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms