RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 LRRC20Q8TCA0 184 aa9.02□□□□□ -0.97
SNX6-207ENST00000556303 CHAC2Q8WUX2 184 aa9.02□□□□□ -0.97
SNX6-207ENST00000556303 UHRF2Q96PU4 802 aa9.02□□□□□ -0.97
SNX6-207ENST00000556303 SLC50A1Q9BRV3 221 aa9.02□□□□□ -0.97
SNX6-207ENST00000556303 NIPSNAP3BQ9BS92 247 aa9.02□□□□□ -0.97
SNX6-207ENST00000556303 CCSO14618 274 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 P0DMU3 169 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 TSPOP30536 169 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 BCAP31P51572 246 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 CAV2P51636 162 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 HBG1P69891 147 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 HBG2P69892 147 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 IL15RAQ13261 267 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 PSG3Q16557 428 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 VWC2Q2TAL6 325 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 GSG1LQ6UXU4 331 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 TMEM256Q8N2U0 113 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 ZNF738Q8NE65 137 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 SEC22CQ9BRL7 303 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 TMEM208Q9BTX3 173 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 C11orf1Q9H5F2 150 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 DNAJC4Q9NNZ3 241 aa9.01□□□□□ -0.97
SNX6-207ENST00000556303 LYRM2Q9NU23 88 aaPredicted RBP9.01□□□□□ -0.97
SNX6-207ENST00000556303 LSM5Q9Y4Y9 91 aaKnown RBP9.01□□□□□ -0.97
SNX6-207ENST00000556303 LOC102723971A0A1B0GUV8 181 aa9□□□□□ -0.97
SNX6-207ENST00000556303 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
SNX6-207ENST00000556303 COX7A2P2O60397 106 aa9□□□□□ -0.97
SNX6-207ENST00000556303 INSP01308 110 aa9□□□□□ -0.97
SNX6-207ENST00000556303 CAMLGP49069 296 aa9□□□□□ -0.97
SNX6-207ENST00000556303 SULT1A1P50225 295 aa9□□□□□ -0.97
SNX6-207ENST00000556303 EMP1P54849 157 aa9□□□□□ -0.97
SNX6-207ENST00000556303 PRR20EP86478 221 aa9□□□□□ -0.97
SNX6-207ENST00000556303 PRR20CP86479 221 aa9□□□□□ -0.97
SNX6-207ENST00000556303 PRR20DP86480 221 aa9□□□□□ -0.97
SNX6-207ENST00000556303 PRR20BP86481 221 aa9□□□□□ -0.97
SNX6-207ENST00000556303 PRR20AP86496 221 aa9□□□□□ -0.97
SNX6-207ENST00000556303 ATP6V1FQ16864 119 aa9□□□□□ -0.97
SNX6-207ENST00000556303 FAM222AQ5U5X8 452 aa9□□□□□ -0.97
SNX6-207ENST00000556303 STX12Q86Y82 276 aa9□□□□□ -0.97
SNX6-207ENST00000556303 RNF182Q8N6D2 247 aa9□□□□□ -0.97
SNX6-207ENST00000556303 OR8A1Q8NGG7 326 aa9□□□□□ -0.97
SNX6-207ENST00000556303 OR1L4Q8NGR5 311 aa9□□□□□ -0.97
SNX6-207ENST00000556303 TMEM37Q8WXS4 190 aa9□□□□□ -0.97
SNX6-207ENST00000556303 PFDN5Q99471 154 aa9□□□□□ -0.97
SNX6-207ENST00000556303 MGST2Q99735 147 aa9□□□□□ -0.97
SNX6-207ENST00000556303 UQCC1Q9NVA1 299 aa9□□□□□ -0.97
SNX6-207ENST00000556303 WDR83OSQ9Y284 106 aa9□□□□□ -0.97
SNX6-207ENST00000556303 LYRM9A8MSI8 78 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 BOLA2-SMG1P6H3BVE0 249 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 MPDU1O75352 247 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
SNX6-207ENST00000556303 GUK1Q16774 197 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 C10orf113Q5VZT2 155 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 IGFL4Q6B9Z1 124 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 NRARPQ7Z6K4 114 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 TMEM252Q8N6L7 170 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 GPN1Q9HCN4 374 aaPredicted RBP8.99□□□□□ -0.97
SNX6-207ENST00000556303 ZNF331Q9NQX6 463 aaPredicted RBP8.99□□□□□ -0.97
SNX6-207ENST00000556303 PPP1R14DQ9NXH3 145 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 PXMP4Q9Y6I8 212 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 FAT2Q9NYQ8 4349 aa8.99□□□□□ -0.97
SNX6-207ENST00000556303 FAM24AA6NFZ4 105 aa8.98□□□□□ -0.97
SNX6-207ENST00000556303 CST7O76096 145 aa8.98□□□□□ -0.97
SNX6-207ENST00000556303 SPINK13Q1W4C9 94 aa8.98□□□□□ -0.97
SNX6-207ENST00000556303 ZNF767PQ75MW2 155 aa8.98□□□□□ -0.97
SNX6-207ENST00000556303 POM121L12Q8N7R1 296 aa8.98□□□□□ -0.97
SNX6-207ENST00000556303 RPUSD4Q96CM3 377 aaKnown RBP8.98□□□□□ -0.97
SNX6-207ENST00000556303 C20orf144Q9BQM9 153 aa8.98□□□□□ -0.97
SNX6-207ENST00000556303 YTHDF2Q9Y5A9 579 aaKnown RBP8.98□□□□□ -0.97
SNX6-207ENST00000556303 M0R2Z0 102 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 PRAF2O60831 178 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 ZNF253O75346 499 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 RLN2P04090 185 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 IGLC2P0DOY2 106 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 CDKN1BP46527 198 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 TAS2R60P59551 318 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 S100A10P60903 97 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 RHOBP62745 196 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 HIST1H1AQ02539 215 aaPredicted RBP8.97□□□□□ -0.97
SNX6-207ENST00000556303 RAB32Q13637 225 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 ENKURQ8TC29 256 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 NMES1Q9C002 83 aa8.97□□□□□ -0.97
SNX6-207ENST00000556303 A6NHS1 94 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 UPK1BO75841 260 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 DAD1P61803 113 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 CYCSP99999 105 aaKnown RBP8.96□□□□□ -0.98
SNX6-207ENST00000556303 OPCMLQ14982 345 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 ZNF493Q6ZR52 646 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 OR10J6PQ8NGY7 276 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 SAT2Q96F10 170 aaPredicted RBP8.96□□□□□ -0.98
SNX6-207ENST00000556303 SLC39A9Q9NUM3 307 aa8.96□□□□□ -0.98
SNX6-207ENST00000556303 IGSF23A1L1A6 192 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 E5RGE8 158 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 BAXQ07812 192 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 RNF212Q495C1 297 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 MIC13Q5XKP0 118 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 LINC00336Q6ZUF6 198 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 MRPL53Q96EL3 112 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms