RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GATAD1Q8WUU5 269 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 PHLDA1Q8WV24 401 aaPredicted RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 RBPMSQ93062 196 aaKnown RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 NARS2Q96I59 477 aaKnown RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 C20orf173Q96LM9 149 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 AQP10Q96PS8 301 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 METTL26Q96S19 204 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM222Q9H0R3 208 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 FNDC4Q9H6D8 234 aaPredicted RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 VSIRQ9H7M9 311 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 MRPL36Q9P0J6 103 aaKnown RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 CACNG5Q9UF02 275 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 RCL1Q9Y2P8 373 aaKnown RBP4.91□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM56-RWDD3S4R434 201 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 C9orf118A6NHY6 69 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 CEBPZOSA8MTT3 80 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 INS-IGF2F8WCM5 200 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 DEDDO75618 318 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 CDS2O95674 445 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 IFNA4P05014 189 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 ZNF688P0C7X2 276 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 RPL12P30050 165 aaKnown RBP4.9□□□□□ -1.63
PSEN1-216ENST00000556066 P2RY1P47900 373 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 NANOS2P60321 138 aaKnown RBP4.9□□□□□ -1.63
PSEN1-216ENST00000556066 SPCS3P61009 180 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 SMCO1Q147U7 214 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 RPL7L1Q6DKI1 246 aaKnown RBP4.9□□□□□ -1.63
PSEN1-216ENST00000556066 TMEM182Q6ZP80 229 aaPredicted RBP4.9□□□□□ -1.63
PSEN1-216ENST00000556066 OR4X1Q8NH49 305 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 C11orf45Q8TAV5 145 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 LINC00052Q96N35 136 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 SMIM3Q9BZL3 60 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 CTDSP1Q9GZU7 261 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 WFDC1Q9HC57 220 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 MED9Q9NWA0 146 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 KMT2AQ03164 3969 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.63
PSEN1-216ENST00000556066 TRAV30A0A087WSZ9 112 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 FAM24AA6NFZ4 105 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 KNCNA6PVL3 124 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 E5RGE8 158 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 IGKV1-17P01599 117 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 PET100P0DJ07 73 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 TPT1P13693 172 aaKnown RBP4.89□□□□□ -1.63
PSEN1-216ENST00000556066 CRYBB3P26998 211 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 RND2P52198 227 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
PSEN1-216ENST00000556066 PVRIGQ6DKI7 326 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 STX12Q86Y82 276 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 BAP18Q8IXM2 172 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
PSEN1-216ENST00000556066 OR4D5Q8NGN0 318 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 STOML3Q8TAV4 291 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 Q8WTZ3 238 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 GPR146Q96CH1 333 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 DAZAP1Q96EP5 407 aaKnown RBP4.89□□□□□ -1.63
PSEN1-216ENST00000556066 PHYHIPLQ96FC7 376 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 ACY3Q96HD9 319 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 GRAMD2BQ96HH9 432 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 MAGT1Q9H0U3 335 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 TMED3Q9Y3Q3 217 aa4.89□□□□□ -1.63
PSEN1-216ENST00000556066 TRAV2A0A0B4J234 112 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 USP17L23D6RBM5 183 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 K7EQG2 157 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 SCO1O75880 301 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 IFNA10P01566 189 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 IGLC1P0CG04 106 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 STAG3L2P0CL84 134 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 NPY1RP25929 384 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 OR10J1P30954 320 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 NKX2-1P43699 371 aaPredicted RBP4.88□□□□□ -1.63
PSEN1-216ENST00000556066 POLR2GP62487 172 aaKnown RBP eCLIP4.88□□□□□ -1.63
PSEN1-216ENST00000556066 SRPXP78539 464 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 BSXQ3C1V8 233 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 C2orf83Q53S99 150 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 PSMG4Q5JS54 123 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 ACTL10Q5JWF8 245 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 OR1S2Q8NGQ3 325 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 OR52E5Q8NH55 327 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 LRRC20Q8TCA0 184 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
PSEN1-216ENST00000556066 C11orf68Q9H3H3 251 aaKnown RBP4.88□□□□□ -1.63
PSEN1-216ENST00000556066 TMPRSS5Q9H3S3 457 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 CLEC5AQ9NY25 188 aa4.88□□□□□ -1.63
PSEN1-216ENST00000556066 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 DUXBA0A1W2PPF3 345 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 IGSF23A1L1A6 192 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 TAAR5O14804 337 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 SSSCA1O60232 199 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 IL4P05112 153 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 RD3LP0DJH9 198 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 NHLH2Q02577 135 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 VWC2Q2TAL6 325 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 NMSQ5H8A3 153 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 SAPCD1Q5SSQ6 148 aa4.87□□□□□ -1.63
PSEN1-216ENST00000556066 TRPT1Q86TN4 253 aaKnown RBP4.87□□□□□ -1.63
PSEN1-216ENST00000556066 C2CD4CQ8TF44 421 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms