RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FAM78BQ5VT40 261 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 IGFL4Q6B9Z1 124 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 C20orf173Q96LM9 149 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 SLC50A1Q9BRV3 221 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 WDR61Q9GZS3 305 aaKnown RBP8.84□□□□□ -0.99
SRP54-206ENST00000555317 F6UB75 175 aa8.83□□□□□ -1
SRP54-206ENST00000555317 GIPP09681 153 aaPredicted RBP8.83□□□□□ -1
SRP54-206ENST00000555317 GUK1Q16774 197 aa8.83□□□□□ -1
SRP54-206ENST00000555317 OR11H7Q8NGC8 314 aa8.83□□□□□ -1
SRP54-206ENST00000555317 C11orf68Q9H3H3 251 aaKnown RBP8.83□□□□□ -1
SRP54-206ENST00000555317 HRH4Q9H3N8 390 aa8.83□□□□□ -1
SRP54-206ENST00000555317 PPP1R14DQ9NXH3 145 aa8.83□□□□□ -1
SRP54-206ENST00000555317 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
SRP54-206ENST00000555317 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
SRP54-206ENST00000555317 GIG44P09565 113 aaPredicted RBP8.82□□□□□ -1
SRP54-206ENST00000555317 MIFP14174 115 aa8.82□□□□□ -1
SRP54-206ENST00000555317 FXYD7P58549 80 aa8.82□□□□□ -1
SRP54-206ENST00000555317 HIST1H1AQ02539 215 aaPredicted RBP8.82□□□□□ -1
SRP54-206ENST00000555317 PMS2P11Q13670 270 aa8.82□□□□□ -1
SRP54-206ENST00000555317 PSG3Q16557 428 aa8.82□□□□□ -1
SRP54-206ENST00000555317 MORN5Q5VZ52 161 aa8.82□□□□□ -1
SRP54-206ENST00000555317 C17orf77Q96MU5 243 aa8.82□□□□□ -1
SRP54-206ENST00000555317 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
SRP54-206ENST00000555317 MFFQ9GZY8 342 aa8.82□□□□□ -1
SRP54-206ENST00000555317 TRAV5A0A0B4J249 113 aa8.81□□□□□ -1
SRP54-206ENST00000555317 H3BTX0 84 aa8.81□□□□□ -1
SRP54-206ENST00000555317 MRPS12O15235 138 aaKnown RBP8.81□□□□□ -1
SRP54-206ENST00000555317 CNN1P51911 297 aaKnown RBP8.81□□□□□ -1
SRP54-206ENST00000555317 RHOBP62745 196 aa8.81□□□□□ -1
SRP54-206ENST00000555317 OXA1LQ15070 435 aa8.81□□□□□ -1
SRP54-206ENST00000555317 GCSAMLQ5JQS6 135 aa8.81□□□□□ -1
SRP54-206ENST00000555317 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
SRP54-206ENST00000555317 INO80EQ8NBZ0 244 aaPredicted RBP8.81□□□□□ -1
SRP54-206ENST00000555317 RPUSD4Q96CM3 377 aaKnown RBP8.81□□□□□ -1
SRP54-206ENST00000555317 MRPL32Q9BYC8 188 aaKnown RBP8.81□□□□□ -1
SRP54-206ENST00000555317 ZNF331Q9NQX6 463 aaPredicted RBP8.81□□□□□ -1
SRP54-206ENST00000555317 GOLT1BQ9Y3E0 138 aa8.81□□□□□ -1
SRP54-206ENST00000555317 TIMM9Q9Y5J7 89 aa8.81□□□□□ -1
SRP54-206ENST00000555317 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
SRP54-206ENST00000555317 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
SRP54-206ENST00000555317 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
SRP54-206ENST00000555317 ZNF705EA8MWA4 302 aaPredicted RBP8.8□□□□□ -1
SRP54-206ENST00000555317 DEFB4AO15263 64 aa8.8□□□□□ -1
SRP54-206ENST00000555317 AMBPP02760 352 aa8.8□□□□□ -1
SRP54-206ENST00000555317 IGLC2P0DOY2 106 aa8.8□□□□□ -1
SRP54-206ENST00000555317 ZNF266Q14584 549 aa8.8□□□□□ -1
SRP54-206ENST00000555317 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
SRP54-206ENST00000555317 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
SRP54-206ENST00000555317 C11orf45Q8TAV5 145 aa8.8□□□□□ -1
SRP54-206ENST00000555317 TMEM208Q9BTX3 173 aa8.8□□□□□ -1
SRP54-206ENST00000555317 SLC35B3Q9H1N7 401 aa8.8□□□□□ -1
SRP54-206ENST00000555317 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
SRP54-206ENST00000555317 NUPR2A6NF83 97 aa8.79□□□□□ -1
SRP54-206ENST00000555317 H3BQ15 152 aa8.79□□□□□ -1
SRP54-206ENST00000555317 SLC17A3O00476 420 aa8.79□□□□□ -1
SRP54-206ENST00000555317 INSP01308 110 aa8.79□□□□□ -1
SRP54-206ENST00000555317 ZNF705DP0CH99 300 aaPredicted RBP8.79□□□□□ -1
SRP54-206ENST00000555317 ZNF705BP0CI00 300 aaPredicted RBP8.79□□□□□ -1
SRP54-206ENST00000555317 HLA-DMBP28068 263 aa8.79□□□□□ -1
SRP54-206ENST00000555317 Q8NAQ8 132 aa8.79□□□□□ -1
SRP54-206ENST00000555317 CSNK1G2-AS1Q8NCQ2 148 aa8.79□□□□□ -1
SRP54-206ENST00000555317 OR8A1Q8NGG7 326 aa8.79□□□□□ -1
SRP54-206ENST00000555317 OR2T35Q8NGX2 323 aa8.79□□□□□ -1
SRP54-206ENST00000555317 BLNKQ8WV28 456 aa8.79□□□□□ -1
SRP54-206ENST00000555317 PARD6GQ9BYG4 376 aaPredicted RBP8.79□□□□□ -1
SRP54-206ENST00000555317 AAMDCQ9H7C9 122 aa8.79□□□□□ -1
SRP54-206ENST00000555317 FUT9Q9Y231 359 aa8.79□□□□□ -1
SRP54-206ENST00000555317 STARD9Q9P2P6 4700 aa8.79□□□□□ -1
SRP54-206ENST00000555317 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
SRP54-206ENST00000555317 OR7C2O60412 319 aa8.78□□□□□ -1
SRP54-206ENST00000555317 ZNF253O75346 499 aa8.78□□□□□ -1
SRP54-206ENST00000555317 PYYP10082 97 aa8.78□□□□□ -1
SRP54-206ENST00000555317 HIST1H1EP10412 219 aaKnown RBP8.78□□□□□ -1
SRP54-206ENST00000555317 TAS2R45P59539 299 aa8.78□□□□□ -1
SRP54-206ENST00000555317 PDE6HQ13956 83 aa8.78□□□□□ -1
SRP54-206ENST00000555317 ACOT6Q3I5F7 207 aaPredicted RBP8.78□□□□□ -1
SRP54-206ENST00000555317 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
SRP54-206ENST00000555317 AQP10Q96PS8 301 aa8.78□□□□□ -1
SRP54-206ENST00000555317 SLC25A2Q9BXI2 301 aa8.78□□□□□ -1
SRP54-206ENST00000555317 X6R8D5 127 aa8.78□□□□□ -1
SRP54-206ENST00000555317 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
SRP54-206ENST00000555317 TRBV19A0A075B6N1 114 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 SMIM9A6NGZ8 99 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1.01
SRP54-206ENST00000555317 M0R2Z0 102 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 JTBO76095 146 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 NANOS2P60321 138 aaKnown RBP8.77□□□□□ -1.01
SRP54-206ENST00000555317 SPINK13Q1W4C9 94 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 KHDC3LQ587J8 217 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 IGF2BP2-AS1Q96M15 143 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 PAXXQ9BUH6 204 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 OR51M1Q9H341 326 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 WFDC1Q9HC57 220 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 ZNF586Q9NXT0 402 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 PRELID1Q9Y255 219 aa8.77□□□□□ -1.01
SRP54-206ENST00000555317 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
SRP54-206ENST00000555317 BORCS7-ASMTA0A0B4J1R7 106 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 A0A1W2PPV4 95 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 TMEM189A5PLL7 270 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms