RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DNAJC4Q9NNZ3 241 aa7.84□□□□□ -1.15
SHMT2-215ENST00000554656 RNF24Q9Y225 148 aa7.84□□□□□ -1.15
SHMT2-215ENST00000554656 FRAS1Q86XX4 4008 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 IGHV3OR16-8A0A075B7F1 116 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 TRAV25A0A0B4J276 109 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 A0A0J9YWU9 116 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 LOC102723971A0A1B0GUV8 181 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 TGOLN2O43493 480 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 IGHV3-48P01763 117 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 BCL2P10415 239 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 S100A7P31151 101 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 CCL20P78556 96 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 ZNF90Q03938 601 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 ODF3L2Q3SX64 289 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 GCSAMLQ5JQS6 135 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 FAM78BQ5VT40 261 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 C10orf113Q5VZT2 155 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 OR51G1Q8NGK1 321 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 SUN5Q8TC36 379 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 CHRDL1Q9BU40 450 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 SEC11CQ9BY50 192 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 EIF5A2Q9GZV4 153 aaKnown RBP7.83□□□□□ -1.16
SHMT2-215ENST00000554656 TREM1Q9NP99 234 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 TMEM167BQ9NRX6 74 aa7.83□□□□□ -1.16
SHMT2-215ENST00000554656 MRPL27Q9P0M9 148 aaKnown RBP7.83□□□□□ -1.16
SHMT2-215ENST00000554656 IGHV3-21A0A0B4J1V1 117 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 HYPMO75409 117 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 RD3LP0DJH9 198 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 PSG1P11464 419 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 GATA2P23769 480 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-215ENST00000554656 ADMP35318 185 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 DEFB135Q30KP9 77 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 TIGITQ495A1 244 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 Q56UQ5 140 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 C10orf91Q5T1B1 145 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 WFDC3Q8IUB2 231 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 Q8WTZ3 238 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 TMEM37Q8WXS4 190 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 SPAG8Q99932 426 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-215ENST00000554656 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 SEPSECSQ9HD40 501 aaKnown RBP7.82□□□□□ -1.16
SHMT2-215ENST00000554656 VAX2Q9UIW0 290 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 CARHSP1Q9Y2V2 147 aaKnown RBP7.82□□□□□ -1.16
SHMT2-215ENST00000554656 UFC1Q9Y3C8 167 aa7.82□□□□□ -1.16
SHMT2-215ENST00000554656 TMEM250H0YL14 139 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 TSPAN4O14817 238 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 NUPL2O15504 423 aaKnown RBP7.81□□□□□ -1.16
SHMT2-215ENST00000554656 ZNF207O43670 478 aaKnown RBP7.81□□□□□ -1.16
SHMT2-215ENST00000554656 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 GCHFRP30047 84 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 FGF8P55075 233 aaPredicted RBP7.81□□□□□ -1.16
SHMT2-215ENST00000554656 ICAM4Q14773 271 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 PATE2Q6UY27 113 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 ZNF600Q6ZNG1 722 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
SHMT2-215ENST00000554656 NARS2Q96I59 477 aaKnown RBP7.81□□□□□ -1.16
SHMT2-215ENST00000554656 LINC00052Q96N35 136 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 HIGD1AQ9Y241 93 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 KMT2AQ03164 3969 aa7.81□□□□□ -1.16
SHMT2-215ENST00000554656 A0A1B0GV50 99 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 CXorf65A6NEN9 183 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 SPRY2O43597 315 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 CTSGP08311 255 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 SRP19P09132 144 aaKnown RBP7.8□□□□□ -1.16
SHMT2-215ENST00000554656 SRSF3P84103 164 aaKnown RBP7.8□□□□□ -1.16
SHMT2-215ENST00000554656 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
SHMT2-215ENST00000554656 SPATA31B1PQ5VZV4 182 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 Q6ZWC4 215 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 MIR17HGQ75NE6 70 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 RNF125Q96EQ8 232 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 FAM167A-AS1Q96KT0 104 aa7.8□□□□□ -1.16
SHMT2-215ENST00000554656 NKX6-2Q9C056 277 aaPredicted RBP7.8□□□□□ -1.16
SHMT2-215ENST00000554656 DAZ1Q9NQZ3 744 aaKnown RBP7.8□□□□□ -1.16
SHMT2-215ENST00000554656 F8W036 122 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 NDUFA4O00483 81 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 LY6G6CO95867 125 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 SFTA3P0C7M3 94 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 RPL35AP18077 110 aaKnown RBP7.79□□□□□ -1.16
SHMT2-215ENST00000554656 ORM2P19652 201 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 LYZP61626 148 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 RELQ04864 619 aaPredicted RBP7.79□□□□□ -1.16
SHMT2-215ENST00000554656 ZNF124Q15973 351 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 LINC00305Q7Z4B0 112 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 OR1B1Q8NGR6 318 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 RXFP4Q8TDU9 374 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 RNF183Q96D59 192 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 RARRES2Q99969 163 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 TMEM231Q9H6L2 316 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 TMEM14CQ9P0S9 112 aa7.79□□□□□ -1.16
SHMT2-215ENST00000554656 KIR2DL5BA0A0G2JN68 375 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 KIR2DL5BA0A0G2JPC4 375 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 A0A1W2PRE2 83 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 F6UZH7 168 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 H3BRN7 92 aa7.78□□□□□ -1.16
SHMT2-215ENST00000554656 HMGB3O15347 200 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms