RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PPP1R14DQ9NXH3 145 aa7.73□□□□□ -1.17
SHMT2-213ENST00000554600 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
SHMT2-213ENST00000554600 A0A087X0K7 114 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 TRAV8-2A0A0B4J237 113 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 H3BTX0 84 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 DUSP14O95147 198 aaKnown RBP7.72□□□□□ -1.17
SHMT2-213ENST00000554600 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
SHMT2-213ENST00000554600 HLA-DMBP28068 263 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 H2BFSP57053 126 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 RHOBP62745 196 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 HIST1H1AQ02539 215 aaPredicted RBP7.72□□□□□ -1.17
SHMT2-213ENST00000554600 OPCMLQ14982 345 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 PSG3Q16557 428 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 VWC2Q2TAL6 325 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 LCN15Q6UWW0 184 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 PPP1R1CQ8WVI7 109 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 TMEM37Q8WXS4 190 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 TMEM208Q9BTX3 173 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 SLC39A9Q9NUM3 307 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 GOLT1BQ9Y3E0 138 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 ALG5Q9Y673 324 aa7.72□□□□□ -1.17
SHMT2-213ENST00000554600 H0YIZ8 118 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 MPDU1O75352 247 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 PET100P0DJ07 73 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 CXCL3P19876 107 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 RPL29P47914 159 aaKnown RBP7.71□□□□□ -1.18
SHMT2-213ENST00000554600 CNN1P51911 297 aaKnown RBP7.71□□□□□ -1.18
SHMT2-213ENST00000554600 EMP1P54849 157 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 PRR20EP86478 221 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 PRR20CP86479 221 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 PRR20DP86480 221 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 PRR20BP86481 221 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 PRR20AP86496 221 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 MORN5Q5VZ52 161 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF709Q8N972 641 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 THAP6Q8TBB0 222 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 CLUHP3Q96NS8 147 aa7.71□□□□□ -1.18
SHMT2-213ENST00000554600 TRAV5A0A0B4J249 113 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 M0R2Z0 102 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 MRPS12O15235 138 aaKnown RBP7.7□□□□□ -1.18
SHMT2-213ENST00000554600 MPC2O95563 127 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 LY6G6CO95867 125 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 SPINK13Q1W4C9 94 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 RGS21Q2M5E4 152 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 OR11H7Q8NGC8 314 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 OR8A1Q8NGG7 326 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 RPUSD4Q96CM3 377 aaKnown RBP7.7□□□□□ -1.18
SHMT2-213ENST00000554600 SLC50A1Q9BRV3 221 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 NPCDR1Q9BY65 106 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 SMIM3Q9BZL3 60 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 MED28Q9H204 178 aa7.7□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
SHMT2-213ENST00000554600 SLC17A3O00476 420 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 INSP01308 110 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 HBE1P02100 147 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 AMBPP02760 352 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 CXCL2P19875 107 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF705AQ6ZN79 300 aaPredicted RBP7.69□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF767PQ75MW2 155 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 C2CD4CQ8TF44 421 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 LINC00476Q8WZB0 136 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 IGF2BP2-AS1Q96M15 143 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 RNF126Q9BV68 326 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 HRH4Q9H3N8 390 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF331Q9NQX6 463 aaPredicted RBP7.69□□□□□ -1.18
SHMT2-213ENST00000554600 KCNIP2Q9NS61 270 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 MBD2Q9UBB5 411 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 CELA1Q9UNI1 258 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 RFNGQ9Y644 331 aa7.69□□□□□ -1.18
SHMT2-213ENST00000554600 LOC102723971A0A1B0GUV8 181 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 IGLL5B9A064 214 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 C11orf94C9JXX5 98 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 C17orf112F2Z3M2 114 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 H3BQ15 152 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 BOLA2-SMG1P6H3BVE0 249 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 IFNA5P01569 189 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 RPL12P30050 165 aaKnown RBP7.68□□□□□ -1.18
SHMT2-213ENST00000554600 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 GCSAMLQ5JQS6 135 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 AMTNQ6UX39 209 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 Q6ZTC4 211 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 BAP18Q8IXM2 172 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 C1orf158Q8N1D5 194 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 NEU1Q99519 415 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 ATP5SQ99766 215 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 HSPB11Q9Y547 144 aa7.68□□□□□ -1.18
SHMT2-213ENST00000554600 TRAV12-2A0A075B6T6 113 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 TRAV10A0A0B4J240 114 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 TMEM189A5PLL7 270 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 A8MTW9 85 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 IGLC2P0DOY2 106 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 FCN2Q15485 313 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 GUK1Q16774 197 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 OR10J6PQ8NGY7 276 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 SCGB1C1Q8TD33 95 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 CHAC2Q8WUX2 184 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 BLNKQ8WV28 456 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 WDR61Q9GZS3 305 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms