RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 C17orf112F2Z3M2 114 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 DEFB4AO15263 64 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 COX7A2P2O60397 106 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 HYPMO75409 117 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 LY6G6CO95867 125 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 RBMY1A1P0DJD3 496 aaKnown RBP6.32□□□□□ -1.4
ACTN1-213ENST00000554508 RBMY1CP0DJD4 496 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 OPCMLQ14982 345 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 RBMY1FQ15415 496 aaKnown RBP6.32□□□□□ -1.4
ACTN1-213ENST00000554508 PXDC1Q5TGL8 231 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 EBLN2Q6P2I7 272 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 TCTE3Q8IZS6 198 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 OR11H4Q8NGC9 324 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 C2CD4CQ8TF44 421 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 RSG1Q9BU20 258 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 SLC25A32Q9H2D1 315 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 SLC25A22Q9H936 323 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 CLEC5AQ9NY25 188 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 XCL2Q9UBD3 114 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 HIGD1AQ9Y241 93 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 PXMP4Q9Y6I8 212 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 X6R8D5 127 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
ACTN1-213ENST00000554508 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 HMSDA8MTL9 139 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 RPL7P18124 248 aaKnown RBP6.31□□□□□ -1.4
ACTN1-213ENST00000554508 RPL29P47914 159 aaKnown RBP6.31□□□□□ -1.4
ACTN1-213ENST00000554508 B2MP61769 119 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 ZNF266Q14584 549 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 C10orf113Q5VZT2 155 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 NEU1Q99519 415 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 SHANK2-AS3Q9BTD1 123 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 SLC25A39Q9BZJ4 359 aaPredicted RBP6.31□□□□□ -1.4
ACTN1-213ENST00000554508 ARV1Q9H2C2 271 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 KCNIP2Q9NS61 270 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 SLC39A9Q9NUM3 307 aa6.31□□□□□ -1.4
ACTN1-213ENST00000554508 ELOA3CA0A087WX78 387 aaPredicted RBP6.3□□□□□ -1.4
ACTN1-213ENST00000554508 BORCS7-ASMTA0A0B4J1R7 106 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 A0A0J9YX75 114 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 H3BRN7 92 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 TAAR5O14804 337 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 IGKV3-20P01619 116 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 C1QBP02746 253 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 HLA-DMBP28068 263 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 DEFB1P60022 68 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PRR20EP86478 221 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PRR20CP86479 221 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PRR20DP86480 221 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PRR20BP86481 221 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PRR20AP86496 221 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PSG9Q00887 426 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 ZNF345Q14585 488 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 FAM78BQ5VT40 261 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PATE2Q6UY27 113 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
ACTN1-213ENST00000554508 LINC00305Q7Z4B0 112 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 HSD17B11Q8NBQ5 300 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 OR4B1Q8NGF8 309 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 OR1L4Q8NGR5 311 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 C17orf77Q96MU5 243 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PFDN5Q99471 154 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 SCRT1Q9BWW7 348 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 PARD6GQ9BYG4 376 aaPredicted RBP6.3□□□□□ -1.4
ACTN1-213ENST00000554508 DNAJC4Q9NNZ3 241 aa6.3□□□□□ -1.4
ACTN1-213ENST00000554508 TRAV10A0A0B4J240 114 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 A0A0D9SG52 128 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 KANTRA0A1W2PQU2 76 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 A8MTW9 85 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
ACTN1-213ENST00000554508 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
ACTN1-213ENST00000554508 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
ACTN1-213ENST00000554508 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
ACTN1-213ENST00000554508 CXCL2P19875 107 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 CD300CQ08708 224 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 ZFP69Q49AA0 526 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 FFAR4Q5NUL3 377 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 RPL7L1Q6DKI1 246 aaKnown RBP6.29□□□□□ -1.4
ACTN1-213ENST00000554508 KCNRGQ8N5I3 272 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 TMEM37Q8WXS4 190 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 HYLS1Q96M11 299 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 ARPC5LQ9BPX5 153 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
ACTN1-213ENST00000554508 A0A087X0K7 114 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 IGLL5B9A064 214 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 F6UB75 175 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 AMBPP02760 352 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 ATP6V0CP27449 155 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 FXYD7P58549 80 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 GCSAMLQ5JQS6 135 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 TMUB2Q71RG4 321 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 SLC35B3Q9H1N7 401 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 TIMM9Q9Y5J7 89 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms