RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 IGLC2P0DOY2 106 aa16.69■□□□□ 0.26
TDP1-206ENST00000553569 ZNF738Q8NE65 137 aa16.69■□□□□ 0.26
TDP1-206ENST00000553569 OR4B1Q8NGF8 309 aa16.69■□□□□ 0.26
TDP1-206ENST00000553569 RFNGQ9Y644 331 aa16.69■□□□□ 0.26
TDP1-206ENST00000553569 RNF222A6NCQ9 220 aa16.68■□□□□ 0.26
TDP1-206ENST00000553569 H3BQ15 152 aa16.68■□□□□ 0.26
TDP1-206ENST00000553569 SMLR1H3BR10 107 aa16.68■□□□□ 0.26
TDP1-206ENST00000553569 GIG44P09565 113 aaPredicted RBP16.68■□□□□ 0.26
TDP1-206ENST00000553569 CXCL2P19875 107 aa16.68■□□□□ 0.26
TDP1-206ENST00000553569 MIR17HGQ75NE6 70 aa16.68■□□□□ 0.26
TDP1-206ENST00000553569 TNFSF18Q9UNG2 199 aa16.68■□□□□ 0.26
TDP1-206ENST00000553569 A0A0J9YX75 114 aa16.67■□□□□ 0.26
TDP1-206ENST00000553569 SLC17A3O00476 420 aa16.67■□□□□ 0.26
TDP1-206ENST00000553569 PRB4P10163 310 aaPredicted RBP16.67■□□□□ 0.26
TDP1-206ENST00000553569 ZNF266Q14584 549 aa16.67■□□□□ 0.26
TDP1-206ENST00000553569 SLC50A1Q9BRV3 221 aa16.67■□□□□ 0.26
TDP1-206ENST00000553569 HRH4Q9H3N8 390 aa16.67■□□□□ 0.26
TDP1-206ENST00000553569 CLEC5AQ9NY25 188 aa16.67■□□□□ 0.26
TDP1-206ENST00000553569 PYYP10082 97 aa16.66■□□□□ 0.26
TDP1-206ENST00000553569 FXYD7P58549 80 aa16.66■□□□□ 0.26
TDP1-206ENST00000553569 NUTF2P61970 127 aaKnown RBP16.66■□□□□ 0.26
TDP1-206ENST00000553569 TMEM41BQ5BJD5 291 aa16.66■□□□□ 0.26
TDP1-206ENST00000553569 SLC25A2Q9BXI2 301 aa16.66■□□□□ 0.26
TDP1-206ENST00000553569 MRPL32Q9BYC8 188 aaKnown RBP16.66■□□□□ 0.26
TDP1-206ENST00000553569 ZNF331Q9NQX6 463 aaPredicted RBP16.66■□□□□ 0.26
TDP1-206ENST00000553569 PSG3Q16557 428 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 HSD17B11Q8NBQ5 300 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 OR11H2Q8NH07 326 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 MUC7Q8TAX7 377 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 RARRES2Q99969 163 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 ZNF586Q9NXT0 402 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 TMEM14CQ9P0S9 112 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 XCL2Q9UBD3 114 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 FUT9Q9Y231 359 aa16.65■□□□□ 0.26
TDP1-206ENST00000553569 A0A0J9YWU9 116 aa16.64■□□□□ 0.25
TDP1-206ENST00000553569 ZNF705DP0CH99 300 aaPredicted RBP16.64■□□□□ 0.25
TDP1-206ENST00000553569 ZNF705BP0CI00 300 aaPredicted RBP16.64■□□□□ 0.25
TDP1-206ENST00000553569 GUK1Q16774 197 aa16.64■□□□□ 0.25
TDP1-206ENST00000553569 ARPC5O15511 151 aa16.63■□□□□ 0.25
TDP1-206ENST00000553569 BLNKQ8WV28 456 aa16.63■□□□□ 0.25
TDP1-206ENST00000553569 SAT2Q96F10 170 aaPredicted RBP16.63■□□□□ 0.25
TDP1-206ENST00000553569 FAM167A-AS1Q96KT0 104 aa16.63■□□□□ 0.25
TDP1-206ENST00000553569 MFFQ9GZY8 342 aa16.63■□□□□ 0.25
TDP1-206ENST00000553569 SLC35B3Q9H1N7 401 aa16.63■□□□□ 0.25
TDP1-206ENST00000553569 TIMM9Q9Y5J7 89 aa16.63■□□□□ 0.25
TDP1-206ENST00000553569 HIST1H1EP10412 219 aaKnown RBP16.62■□□□□ 0.25
TDP1-206ENST00000553569 CNN1P51911 297 aaKnown RBP16.62■□□□□ 0.25
TDP1-206ENST00000553569 PSG9Q00887 426 aa16.62■□□□□ 0.25
TDP1-206ENST00000553569 HIST1H1AQ02539 215 aaPredicted RBP16.62■□□□□ 0.25
TDP1-206ENST00000553569 ACOT6Q3I5F7 207 aaPredicted RBP16.62■□□□□ 0.25
TDP1-206ENST00000553569 RPUSD4Q96CM3 377 aaKnown RBP16.62■□□□□ 0.25
TDP1-206ENST00000553569 C1QTNF4Q9BXJ3 329 aa16.62■□□□□ 0.25
TDP1-206ENST00000553569 TRBV19A0A075B6N1 114 aa16.61■□□□□ 0.25
TDP1-206ENST00000553569 ZNF705FA8MVS1 300 aaPredicted RBP16.61■□□□□ 0.25
TDP1-206ENST00000553569 DUSP14O95147 198 aaKnown RBP16.61■□□□□ 0.25
TDP1-206ENST00000553569 RHOBP62745 196 aa16.61■□□□□ 0.25
TDP1-206ENST00000553569 RPL7L1Q6DKI1 246 aaKnown RBP16.61■□□□□ 0.25
TDP1-206ENST00000553569 CLUHP3Q96NS8 147 aa16.61■□□□□ 0.25
TDP1-206ENST00000553569 PAXXQ9BUH6 204 aa16.61■□□□□ 0.25
TDP1-206ENST00000553569 OR7C2O60412 319 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 EIF3GO75821 320 aaKnown RBP eCLIP16.6■□□□□ 0.25
TDP1-206ENST00000553569 OR10J4P0C629 311 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 ATP6V0CP27449 155 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 RAB2AP61019 212 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 CSNK1G2-AS1Q8NCQ2 148 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 OR8A1Q8NGG7 326 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 OR51M1Q9H341 326 aa16.6■□□□□ 0.25
TDP1-206ENST00000553569 BORCS7-ASMTA0A0B4J1R7 106 aa16.59■□□□□ 0.25
TDP1-206ENST00000553569 ZNF253O75346 499 aa16.59■□□□□ 0.25
TDP1-206ENST00000553569 M6PRP20645 277 aa16.59■□□□□ 0.25
TDP1-206ENST00000553569 ZFAND6Q6FIF0 208 aa16.59■□□□□ 0.25
TDP1-206ENST00000553569 FAM122CQ6P4D5 195 aa16.59■□□□□ 0.25
TDP1-206ENST00000553569 SH3BGRL3Q9H299 93 aa16.59■□□□□ 0.25
TDP1-206ENST00000553569 A8MTW9 85 aa16.58■□□□□ 0.24
TDP1-206ENST00000553569 C3orf84H3BNL1 204 aa16.58■□□□□ 0.24
TDP1-206ENST00000553569 NDUFB4O95168 129 aa16.58■□□□□ 0.24
TDP1-206ENST00000553569 KHDC3LQ587J8 217 aa16.58■□□□□ 0.24
TDP1-206ENST00000553569 AMTNQ6UX39 209 aa16.58■□□□□ 0.24
TDP1-206ENST00000553569 PSMG3Q9BT73 122 aaPredicted RBP16.58■□□□□ 0.24
TDP1-206ENST00000553569 PRAC2D3DTV9 90 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 DEFB4AO15263 64 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 TAS2R45P59539 299 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 PDE6HQ13956 83 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 Q6ZNX1 250 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 OR10G4Q8NGN3 311 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 OR10G9Q8NGN4 311 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 OR10G7Q8NGN6 311 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 RNF141Q8WVD5 230 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 FXYD5Q96DB9 178 aa16.57■□□□□ 0.24
TDP1-206ENST00000553569 A0A1W2PPV4 95 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 NBEAP1P0C6P0 100 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 UBE2L3P68036 154 aaKnown RBP16.56■□□□□ 0.24
TDP1-206ENST00000553569 SPINK13Q1W4C9 94 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 EXOC3-AS1Q8N2X6 119 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 OR11H4Q8NGC9 324 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 OR2G3Q8NGZ4 309 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 ZNF503Q96F45 646 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 PPP1R14DQ9NXH3 145 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 X6R8D5 127 aa16.56■□□□□ 0.24
TDP1-206ENST00000553569 IGHV3OR16-12A0A075B7B8 117 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms