RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 Q6ZR54 194 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 TOMM5Q8N4H5 51 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 RNF182Q8N6D2 247 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 THAP8Q8NA92 274 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 OR11H7Q8NGC8 314 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 LINC01587Q99440 93 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 HIGD1AQ9Y241 93 aa7.02□□□□□ -1.29
ACTN1-208ENST00000553370 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 ATP5G1P05496 136 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 RPL7P18124 248 aaKnown RBP7.01□□□□□ -1.29
ACTN1-208ENST00000553370 GATA2P23769 480 aaPredicted RBP7.01□□□□□ -1.29
ACTN1-208ENST00000553370 ATP5G3P48201 142 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 INPP1P49441 399 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 ACOT7LQ6ZUV0 252 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 CCDC28AQ8IWP9 274 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 TMEM256Q8N2U0 113 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 OR4D5Q8NGN0 318 aa7.01□□□□□ -1.29
ACTN1-208ENST00000553370 SLC25A39Q9BZJ4 359 aaPredicted RBP7.01□□□□□ -1.29
ACTN1-208ENST00000553370 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
ACTN1-208ENST00000553370 PKD1P98161 4303 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 IGKV1OR2-108A0A075B7D4 117 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 ZNF701M0R085 212 aaPredicted RBP7□□□□□ -1.29
ACTN1-208ENST00000553370 HYPMO75409 117 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 LINC00869P0C866 280 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 SLC25A6P12236 298 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 ANXA7P20073 488 aaKnown RBP7□□□□□ -1.29
ACTN1-208ENST00000553370 C6orf223Q8N319 242 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 DYNC2LI1Q8TCX1 351 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 C16orf74Q96GX8 76 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 BCL7BQ9BQE9 202 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 MGAT4CQ9UBM8 478 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 RNF24Q9Y225 148 aa7□□□□□ -1.29
ACTN1-208ENST00000553370 NBDYA0A0U1RRE5 68 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 CCDC160A6NGH7 325 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 SSSCA1O60232 199 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 ADAP1O75689 374 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 SFT2D2O95562 160 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 TNFSF8P32971 234 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 S100A5P33763 92 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 TMBIM6P55061 237 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 RRAS2P62070 204 aaPredicted RBP6.99□□□□□ -1.29
ACTN1-208ENST00000553370 PPP1R1AQ13522 171 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 AMTNQ6UX39 209 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 CYP2G1PQ6ZSU1 146 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 TMEM144Q7Z5S9 345 aa6.99□□□□□ -1.29
ACTN1-208ENST00000553370 SLC25A21Q9BQT8 299 aaPredicted RBP6.99□□□□□ -1.29
ACTN1-208ENST00000553370 H3BRN7 92 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 PITX3O75364 302 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 PRM2P04554 102 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 TSPOP30536 169 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 SELENOTP62341 195 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 OR5I1Q13606 314 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 FCN2Q15485 313 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 TTC32Q5I0X7 151 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 LRTM2Q8N967 370 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 OR8A1Q8NGG7 326 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 OR10J6PQ8NGY7 276 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 UHRF2Q96PU4 802 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 SHANK2-AS3Q9BTD1 123 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 ARL6Q9H0F7 186 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 PSENENQ9NZ42 101 aa6.98□□□□□ -1.29
ACTN1-208ENST00000553370 TIMM8BQ9Y5J9 83 aaPredicted RBP6.98□□□□□ -1.29
ACTN1-208ENST00000553370 CBY3A6NI87 242 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 A8MTW9 85 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 CDKN1BP46527 198 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 TAS2R60P59551 318 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 PSG3Q16557 428 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 CCDC190Q86UF4 302 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 MAPKAPK5-AS1Q8N8E1 139 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 RPUSD4Q96CM3 377 aaKnown RBP6.97□□□□□ -1.29
ACTN1-208ENST00000553370 GNPNAT1Q96EK6 184 aaPredicted RBP6.97□□□□□ -1.29
ACTN1-208ENST00000553370 RBM38Q9H0Z9 239 aaKnown RBP6.97□□□□□ -1.29
ACTN1-208ENST00000553370 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
ACTN1-208ENST00000553370 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
ACTN1-208ENST00000553370 TRAV8-2A0A0B4J237 113 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 SNURFLB1AK76 121 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 H3BMQ9 156 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 GOSR2O14653 212 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 COX7A2P2O60397 106 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 RLN2P04090 185 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 PRB4P10163 310 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-208ENST00000553370 CXCL3P19876 107 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 AZU1P20160 251 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 POLR2GP62487 172 aaKnown RBP eCLIP6.96□□□□□ -1.3
ACTN1-208ENST00000553370 TRIQKQ629K1 86 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 LCN15Q6UWW0 184 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 TMEM182Q6ZP80 229 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-208ENST00000553370 SSX7Q7RTT5 188 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 ZNF546Q86UE3 836 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 TMEM263Q8WUH6 116 aaKnown RBP6.96□□□□□ -1.3
ACTN1-208ENST00000553370 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 DNAH11Q96DT5 4516 aa6.96□□□□□ -1.3
ACTN1-208ENST00000553370 A0A087X0K7 114 aa6.95□□□□□ -1.3
ACTN1-208ENST00000553370 PRSS46E5RG02 174 aa6.95□□□□□ -1.3
ACTN1-208ENST00000553370 H7BYZ3 331 aa6.95□□□□□ -1.3
ACTN1-208ENST00000553370 CRXO43186 299 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms