RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ANXA10Q9UJ72 324 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
CKAP4-203ENST00000553039 ALG5Q9Y673 324 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 HELTA6NFD8 242 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 SNRPGP15A8MWD9 76 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 H3BMM0 161 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 H3BTX0 84 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 SIVA1O15304 175 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 SSNA1O43805 119 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 CCNKO75909 580 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 IL5P05113 134 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 SERPINE2P07093 398 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 OR13C7P0DN81 318 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 TAS2R31P59538 309 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 HERV-K104P61576 105 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 B2MP61769 119 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 HLA-DRB3P79483 266 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 DHRS2Q13268 280 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 OR5I1Q13606 314 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 SURF2Q15527 256 aaPredicted RBP3.52□□□□□ -1.85
CKAP4-203ENST00000553039 ACOT6Q3I5F7 207 aaPredicted RBP3.52□□□□□ -1.85
CKAP4-203ENST00000553039 LINC01620Q4KN68 170 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 PSMG4Q5JS54 123 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 Q6ZS49 121 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 TMED4Q7Z7H5 227 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 VKORC1L1Q8N0U8 176 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 PUSL1Q8N0Z8 303 aaKnown RBP3.52□□□□□ -1.85
CKAP4-203ENST00000553039 FAM24BQ8N5W8 94 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 PRR26Q8N8Z3 221 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 OR4A4PQ8NGN8 299 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 OR6F1Q8NGZ6 308 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 OR4S2Q8NH73 311 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 PRSS3P2Q8NHM4 247 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 RXFP4Q8TDU9 374 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 UHRF2Q96PU4 802 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 HDHD3Q9BSH5 251 aaPredicted RBP3.52□□□□□ -1.85
CKAP4-203ENST00000553039 TMEM208Q9BTX3 173 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 MED28Q9H204 178 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 FLVCR2Q9UPI3 526 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 HMCN2Q8NDA2 5059 aa3.52□□□□□ -1.85
CKAP4-203ENST00000553039 TRAV26-1A0A087WT03 109 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 H3BNG1 76 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 BET1O15155 118 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 GNG7O60262 68 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 CTXN2P0C2S0 81 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 ANXA3P12429 323 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 UBE2MP61081 183 aaKnown RBP3.51□□□□□ -1.85
CKAP4-203ENST00000553039 ZFP69Q49AA0 526 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 SPATA31B1PQ5VZV4 182 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 TOMM20LQ6UXN7 152 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 LHFPL1Q86WI0 220 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 OR13C8Q8NGS7 320 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 TERB2Q8NHR7 220 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 MAFIPQ8WZ33 124 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 METTL26Q96S19 204 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 HSD17B10Q99714 261 aaKnown RBP3.51□□□□□ -1.85
CKAP4-203ENST00000553039 BET1LQ9NYM9 111 aa3.51□□□□□ -1.85
CKAP4-203ENST00000553039 C14orf166Q9Y224 244 aaKnown RBP3.51□□□□□ -1.85
CKAP4-203ENST00000553039 IGKV1D-8A0A087WSZ0 117 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 TRBV6-7A0A0A0MS04 114 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 IGHV3-21A0A0B4J1V1 117 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 IGHV3-66A0A0C4DH42 116 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 IGLC7A0M8Q6 106 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 FABP7O15540 132 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 ADAP1O75689 374 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 OR4E1P0C645 316 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 SULT1A3P0DMM9 295 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 SULT1A4P0DMN0 295 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 HLA-DRB4P13762 266 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 PGAM2P15259 253 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 AKR1C4P17516 323 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 M6PRP20645 277 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 FCGR2CP31995 323 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 PSG9Q00887 426 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 FCN2Q15485 313 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 TMEM128Q5BJH2 165 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 AADACL3Q5VUY0 350 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 LPCAT3Q6P1A2 487 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 CMTM1Q8IZ96 169 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 TCTE3Q8IZS6 198 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 OR11H7Q8NGC8 314 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 OR10J6PQ8NGY7 276 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 ZFAND1Q8TCF1 268 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 MARCH1Q8TCQ1 289 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 ZNF431Q8TF32 576 aaPredicted RBP3.5□□□□□ -1.85
CKAP4-203ENST00000553039 DCANP1Q8TF63 244 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 ASB13Q8WXK3 278 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 RBPMSQ93062 196 aaKnown RBP3.5□□□□□ -1.85
CKAP4-203ENST00000553039 MRGPRFQ96AM1 343 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 CYYR1Q96J86 154 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 ST6GAL2Q96JF0 529 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 SEC22CQ9BRL7 303 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 ZNF2Q9BSG1 426 aaPredicted RBP3.5□□□□□ -1.85
CKAP4-203ENST00000553039 DPH3P1Q9H4G8 78 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 F11RQ9Y624 299 aaKnown RBP3.5□□□□□ -1.85
CKAP4-203ENST00000553039 HLA-DRB4X5D2U9 266 aa3.5□□□□□ -1.85
CKAP4-203ENST00000553039 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 IGKV1-6A0A0C4DH72 117 aa3.49□□□□□ -1.85
CKAP4-203ENST00000553039 SERTM2A0A1B0GWG4 89 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms