RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 BAK1Q16611 211 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 SMIM8Q96KF7 97 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 PARD6GQ9BYG4 376 aaPredicted RBP8.05□□□□□ -1.12
NEK3-204ENST00000552973 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 SRRQ9GZT4 340 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 ARV1Q9H2C2 271 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 NPVFQ9HCQ7 196 aa8.05□□□□□ -1.12
NEK3-204ENST00000552973 A0A087X0K7 114 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 MRPS12O15235 138 aaKnown RBP8.04□□□□□ -1.12
NEK3-204ENST00000552973 NDUFB6O95139 128 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 ATP5G1P05496 136 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 OR4E1P0C645 316 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 TSPOP30536 169 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 ATP5G3P48201 142 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 TAS2R60P59551 318 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 UBE2MP61081 183 aaKnown RBP8.04□□□□□ -1.12
NEK3-204ENST00000552973 SELENOTP62341 195 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 DLK1P80370 383 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 ARL16Q0P5N6 197 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 C4orf46Q504U0 113 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 TMEM14EPQ6UXP3 125 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 OR10P1Q8NGE3 313 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 ZNRF2Q8NHG8 242 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 RNF141Q8WVD5 230 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 DEDD2Q8WXF8 326 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
NEK3-204ENST00000552973 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
NEK3-204ENST00000552973 GSKIPQ9P0R6 139 aa8.04□□□□□ -1.12
NEK3-204ENST00000552973 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 CBY3A6NI87 242 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 PRAC2D3DTV9 90 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 J3KRW8 73 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 CDKN1BP46527 198 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 FAM3BP58499 235 aaPredicted RBP8.03□□□□□ -1.12
NEK3-204ENST00000552973 IAH1Q2TAA2 248 aaPredicted RBP8.03□□□□□ -1.12
NEK3-204ENST00000552973 TRIQKQ629K1 86 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 LINC00305Q7Z4B0 112 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 MGAT4CQ9UBM8 478 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 LINC00588Q9Y4M8 146 aa8.03□□□□□ -1.12
NEK3-204ENST00000552973 NAP1L6A6NFF2 107 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 GOSR2O14653 212 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 AGPAT2O15120 278 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 CCL18P55774 89 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 OR5I1Q13606 314 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 SPANXN2Q5MJ10 180 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 MORN5Q5VZ52 161 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 TEPPQ6URK8 271 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 TMEM256Q8N2U0 113 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 C6orf223Q8N319 242 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 ZBTB8BQ8NAP8 495 aaPredicted RBP8.02□□□□□ -1.13
NEK3-204ENST00000552973 C16orf74Q96GX8 76 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
NEK3-204ENST00000552973 TIMM8BQ9Y5J9 83 aaPredicted RBP8.02□□□□□ -1.13
NEK3-204ENST00000552973 PKD1P98161 4303 aa8.02□□□□□ -1.13
NEK3-204ENST00000552973 RYR1P21817 5038 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 A0A0J9YY99 117 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 SLC17A3O00476 420 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 COX7A2P2O60397 106 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 CLINT1Q14677 625 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 SSX7Q7RTT5 188 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 S100A7AQ86SG5 101 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 RNASE8Q8TDE3 154 aaKnown RBP8.01□□□□□ -1.13
NEK3-204ENST00000552973 TMEM37Q8WXS4 190 aa8.01□□□□□ -1.13
NEK3-204ENST00000552973 RCL1Q9Y2P8 373 aaKnown RBP8.01□□□□□ -1.13
NEK3-204ENST00000552973 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
NEK3-204ENST00000552973 C7orf66A4D0T2 115 aa8□□□□□ -1.13
NEK3-204ENST00000552973 FNDC10F2Z333 226 aa8□□□□□ -1.13
NEK3-204ENST00000552973 H7BYZ3 331 aa8□□□□□ -1.13
NEK3-204ENST00000552973 K7EPK0 472 aa8□□□□□ -1.13
NEK3-204ENST00000552973 CCSO14618 274 aa8□□□□□ -1.13
NEK3-204ENST00000552973 TSC22D2O75157 780 aa8□□□□□ -1.13
NEK3-204ENST00000552973 MBPP02686 304 aaPredicted RBP8□□□□□ -1.13
NEK3-204ENST00000552973 BTCP35070 178 aa8□□□□□ -1.13
NEK3-204ENST00000552973 OPCMLQ14982 345 aa8□□□□□ -1.13
NEK3-204ENST00000552973 GFI1BQ5VTD9 330 aa8□□□□□ -1.13
NEK3-204ENST00000552973 LCN15Q6UWW0 184 aa8□□□□□ -1.13
NEK3-204ENST00000552973 ZNF546Q86UE3 836 aa8□□□□□ -1.13
NEK3-204ENST00000552973 TMEM263Q8WUH6 116 aaKnown RBP8□□□□□ -1.13
NEK3-204ENST00000552973 SDHCQ99643 169 aaPredicted RBP8□□□□□ -1.13
NEK3-204ENST00000552973 MGST2Q99735 147 aa8□□□□□ -1.13
NEK3-204ENST00000552973 TRAV26-1A0A087WT03 109 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 GAGE12BA1L429 117 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 CENPXA8MT69 81 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 H3BQ15 152 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 L7N2F9 121 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 GAGE7O76087 117 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 GAGE12FP0CL80 117 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 GAGE12GP0CL81 117 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 GAGE12IP0CL82 117 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 CXCL2P19875 107 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 BCAP31P51572 246 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 TAS2R30P59541 319 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 VAMP2P63027 116 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 PXDC1Q5TGL8 231 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 C10orf113Q5VZT2 155 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 ZNF493Q6ZR52 646 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 BPIFA4PQ86YQ2 179 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 CCDC28AQ8IWP9 274 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 OR10J6PQ8NGY7 276 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms