RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	GGTLC1	Q9BX51	225 aa		4.91	□□□□□ -1.62
CNOT2-238	ENST00000552422	MAP6D1	Q9H9H5	199 aa		4.91	□□□□□ -1.62
CNOT2-238	ENST00000552422	NRN1	Q9NPD7	142 aa		4.91	□□□□□ -1.62
CNOT2-238	ENST00000552422	FBXL17	Q9UF56	701 aa		4.91	□□□□□ -1.62
CNOT2-238	ENST00000552422	UBQLN2	Q9UHD9	624 aa		4.91	□□□□□ -1.62
CNOT2-238	ENST00000552422	ZNF98	A6NK75	572 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422		H3BRN7	92 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	MPDU1	O75352	247 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	HYPM	O75409	117 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	S100A7	P31151	101 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	CAMLG	P49069	296 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	CMC4	P56277	68 aa	Predicted RBP	4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	RAB31	Q13636	194 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	OPCML	Q14982	345 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	HAGH	Q16775	308 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	APRG1	Q8IVJ8	170 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	OR8I2	Q8N0Y5	310 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	THAP6	Q8TBB0	222 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	PPP1R14B	Q96C90	147 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	GPR82	Q96P67	336 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	UHRF2	Q96PU4	802 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	ASCL2	Q99929	193 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	SHANK2-AS3	Q9BTD1	123 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	SCRT1	Q9BWW7	348 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	NPCDR1	Q9BY65	106 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	ARL6	Q9H0F7	186 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC25A32	Q9H2D1	315 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC25A22	Q9H936	323 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	DOK5	Q9P104	306 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	HIGD1A	Q9Y241	93 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	HSPB11	Q9Y547	144 aa		4.9	□□□□□ -1.63
CNOT2-238	ENST00000552422	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	SOCS3	O14543	225 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	IGKV2-30	P06310	120 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	OR5G3	P0C626	314 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	ZNF688	P0C7X2	276 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	FGF7	P21781	194 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	RPL12	P30050	165 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	GALR1	P47211	349 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	RPL29	P47914	159 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	DEFB131A	P59861	70 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	SNRPD3	P62318	126 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	CLINT1	Q14677	625 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	MIC13	Q5XKP0	118 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	LEMD1	Q68G75	181 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	PATE2	Q6UY27	113 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	S100A7A	Q86SG5	101 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	TMEM37	Q8WXS4	190 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	C17orf77	Q96MU5	243 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	ATP5S	Q99766	215 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	ARV1	Q9H2C2	271 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	SEPSECS	Q9HD40	501 aa	Known RBP	4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC39A9	Q9NUM3	307 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422		U3KQK5	164 aa		4.89	□□□□□ -1.63
CNOT2-238	ENST00000552422	KIR2DL5B	A0A0G2JN68	375 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	KIR2DL5B	A0A0G2JPC4	375 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422		G3V3Q6	166 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	ISLR	O14498	428 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	COX7A2P2	O60397	106 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	RPL7	P18124	248 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	PSMB3	P49720	205 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	MEOX2	P50222	304 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	APOC4	P55056	127 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	B2M	P61769	119 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	SUMO2	P61956	95 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	FGL1	Q08830	312 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422		Q5BKY6	102 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	PSMG4	Q5JS54	123 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	SAMD13	Q5VXD3	122 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	C10orf113	Q5VZT2	155 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422		Q6ZRG5	221 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	LINC00305	Q7Z4B0	112 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	KIR2DL5A	Q8N109	375 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	OR2T35	Q8NGX2	323 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	KIR2DL5B	Q8NHK3	375 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	PRSS3P2	Q8NHM4	247 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	RCHY1	Q96PM5	261 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	AQP10	Q96PS8	301 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	PFDN5	Q99471	154 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	WDR61	Q9GZS3	305 aa	Known RBP	4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	KCNIP2	Q9NS61	270 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	RNF24	Q9Y225	148 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	PXMP4	Q9Y6I8	212 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422	STARD9	Q9P2P6	4700 aa		4.88	□□□□□ -1.63
CNOT2-238	ENST00000552422		A0A087X0K7	114 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	MRPS12	O15235	138 aa	Known RBP	4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	ID1	P41134	155 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	TRPT1	Q86TN4	253 aa	Known RBP	4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	OR1L4	Q8NGR5	311 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	GATAD1	Q8WUU5	269 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	RSG1	Q9BU20	258 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	SMIM3	Q9BZL3	60 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	DNAJC4	Q9NNZ3	241 aa		4.87	□□□□□ -1.63
CNOT2-238	ENST00000552422	RNF222	A6NCQ9	220 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	KNCN	A6PVL3	124 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	C17orf112	F2Z3M2	114 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms